Literature DB >> 24481076

Multiple layers of posttranslational regulation refine circadian clock activity in Arabidopsis.

Pil Joon Seo1, Paloma Mas.   

Abstract

The circadian clock is a cellular time-keeper mechanism that regulates biological rhythms with a period of ~24 h. The circadian rhythms in metabolism, physiology, and development are synchronized by environmental cues such as light and temperature. In plants, proper matching of the internal circadian time with the external environment confers fitness advantages on plant survival and propagation. Accordingly, plants have evolved elaborated regulatory mechanisms that precisely control the circadian oscillations. Transcriptional feedback regulation of several clock components has been well characterized over the past years. However, the importance of additional regulatory mechanisms such as chromatin remodeling, protein complexes, protein phosphorylation, and stability is only starting to emerge. The multiple layers of circadian regulation enable plants to properly synchronize with the environmental cycles and to fine-tune the circadian oscillations. This review focuses on the diverse posttranslational events that regulate circadian clock function. We discuss the mechanistic insights explaining how plants articulate a high degree of complexity in their regulatory networks to maintain circadian homeostasis and to generate highly precise waveforms of circadian expression and activity.

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Year:  2014        PMID: 24481076      PMCID: PMC3963595          DOI: 10.1105/tpc.113.119842

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  95 in total

1.  Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes.

Authors:  Ritu Pandey; Andreas Müller; Carolyn A Napoli; David A Selinger; Craig S Pikaard; Eric J Richards; Judith Bender; David W Mount; Richard A Jorgensen
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

Review 2.  Chromatin dynamics and Arabidopsis development.

Authors:  Frédéric Berger; Valérie Gaudin
Journal:  Chromosome Res       Date:  2003       Impact factor: 5.239

Review 3.  Protein kinase CK2: a challenge to canons.

Authors:  Lorenzo A Pinna
Journal:  J Cell Sci       Date:  2002-10-15       Impact factor: 5.285

4.  Arabidopsis circadian clock protein, TOC1, is a DNA-binding transcription factor.

Authors:  Joshua M Gendron; José L Pruneda-Paz; Colleen J Doherty; Andrew M Gross; S Earl Kang; Steve A Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-06       Impact factor: 11.205

5.  Coordinated transcriptional regulation underlying the circadian clock in Arabidopsis.

Authors:  Gang Li; Hamad Siddiqui; Yibo Teng; Rongcheng Lin; Xiang-yuan Wan; Jigang Li; On-Sun Lau; Xinhao Ouyang; Mingqiu Dai; Jianmin Wan; Paul F Devlin; Xing Wang Deng; Haiyang Wang
Journal:  Nat Cell Biol       Date:  2011-04-17       Impact factor: 28.824

6.  The ubiquitin-specific protease UBP14 is essential for early embryo development in Arabidopsis thaliana.

Authors:  J H Doelling; N Yan; J Kurepa; J Walker; R D Vierstra
Journal:  Plant J       Date:  2001-09       Impact factor: 6.417

7.  Protein kinase CK2 interacts with and phosphorylates the Arabidopsis circadian clock-associated 1 protein.

Authors:  S Sugano; C Andronis; R M Green; Z Y Wang; E M Tobin
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-01       Impact factor: 11.205

8.  ELF4 regulates GIGANTEA chromatin access through subnuclear sequestration.

Authors:  Yumi Kim; Junhyun Lim; Miji Yeom; Hyunmin Kim; Jeongsik Kim; Lei Wang; Woe Yeon Kim; David E Somers; Hong Gil Nam
Journal:  Cell Rep       Date:  2013-03-21       Impact factor: 9.423

9.  A functional link between rhythmic changes in chromatin structure and the Arabidopsis biological clock.

Authors:  Mariano Perales; Paloma Más
Journal:  Plant Cell       Date:  2007-07-06       Impact factor: 11.277

10.  Experimental validation of a predicted feedback loop in the multi-oscillator clock of Arabidopsis thaliana.

Authors:  James C W Locke; László Kozma-Bognár; Peter D Gould; Balázs Fehér; Eva Kevei; Ferenc Nagy; Matthew S Turner; Anthony Hall; Andrew J Millar
Journal:  Mol Syst Biol       Date:  2006-11-14       Impact factor: 11.429

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  37 in total

Review 1.  It's Time for Some "Site"-Seeing: Novel Tools to Monitor the Ubiquitin Landscape in Arabidopsis thaliana.

Authors:  Alan Walton; Elisabeth Stes; Nicolas Cybulski; Michiel Van Bel; Sabrina Iñigo; Astrid Nagels Durand; Evy Timmerman; Jefri Heyman; Laurens Pauwels; Lieven De Veylder; Alain Goossens; Ive De Smet; Frederik Coppens; Sofie Goormachtig; Kris Gevaert
Journal:  Plant Cell       Date:  2016-01-07       Impact factor: 11.277

Review 2.  Epigenetic events in plant male germ cell heat stress responses.

Authors:  Yuanyuan Chen; Florian Müller; Ivo Rieu; Peter Winter
Journal:  Plant Reprod       Date:  2015-12-06       Impact factor: 3.767

3.  CIRCADIAN CLOCK ASSOCIATED1 (CCA1) and the Circadian Control of Stomatal Aperture.

Authors:  Miriam Hassidim; Yuri Dakhiya; Adi Turjeman; Duaa Hussien; Ekaterina Shor; Ariane Anidjar; Keren Goldberg; Rachel M Green
Journal:  Plant Physiol       Date:  2017-10-30       Impact factor: 8.340

4.  Epigenetic basis of morphological variation and phenotypic plasticity in Arabidopsis thaliana.

Authors:  Rik Kooke; Frank Johannes; René Wardenaar; Frank Becker; Mathilde Etcheverry; Vincent Colot; Dick Vreugdenhil; Joost J B Keurentjes
Journal:  Plant Cell       Date:  2015-02-10       Impact factor: 11.277

5.  Time-dependent sequestration of RVE8 by LNK proteins shapes the diurnal oscillation of anthocyanin biosynthesis.

Authors:  Pablo Pérez-García; Yuan Ma; Marcelo J Yanovsky; Paloma Mas
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

6.  Dependence and independence of the root clock on the shoot clock in Arabidopsis.

Authors:  Hong Gil Lee; Pil Joon Seo
Journal:  Genes Genomics       Date:  2018-06-13       Impact factor: 1.839

7.  The plant cell reviews aspects of photobiology: it's a matter of stop 'n go.

Authors:  Nancy A Eckardt
Journal:  Plant Cell       Date:  2014-01-30       Impact factor: 11.277

Review 8.  The Plant Circadian Clock: From a Simple Timekeeper to a Complex Developmental Manager.

Authors:  Sabrina E Sanchez; Steve A Kay
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-12-01       Impact factor: 10.005

Review 9.  Monitoring circadian rhythms of individual cells in plants.

Authors:  Tomoaki Muranaka; Tokitaka Oyama
Journal:  J Plant Res       Date:  2017-12-04       Impact factor: 2.629

10.  Compensatory Mutations in GI and ZTL May Modulate Temperature Compensation in the Circadian Clock.

Authors:  Tae-Sung Kim; Lei Wang; Yeon Jeong Kim; David E Somers
Journal:  Plant Physiol       Date:  2019-11-18       Impact factor: 8.340

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