Literature DB >> 24480175

miRClassify: an advanced web server for miRNA family classification and annotation.

Quan Zou1, Yaozong Mao2, Lingling Hu2, Yunfeng Wu2, Zhiliang Ji3.   

Abstract

MicroRNA (miRNA) family is a group of miRNAs that derive from the common ancestor. Normally, members from the same miRNA family have similar physiological functions; however, they are not always conserved in primary sequence or secondary structure. Proper family prediction from primary sequence will be helpful for accurate identification and further functional annotation of novel miRNA. Therefore, we introduced a novel machine learning-based web server, the miRClassify, which can rapidly identify miRNA from the primary sequence and classify it into a miRNA family regardless of similarity in sequence and structure. Additionally, the medical implication of the miRNA family is also provided when it is available in PubMed. The web server is accessible at the link http://datamining.xmu.edu.cn/software/MIR/home.html. Crown
Copyright © 2013. Published by Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Classification; Machine learning; Microrna family

Mesh:

Substances:

Year:  2013        PMID: 24480175     DOI: 10.1016/j.compbiomed.2013.12.007

Source DB:  PubMed          Journal:  Comput Biol Med        ISSN: 0010-4825            Impact factor:   4.589


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