Literature DB >> 24473221

Characterization of inosine-uridine nucleoside hydrolase (RihC) from Escherichia coli.

Brock Arivett1, Mary Farone1, Ranjith Masiragani2, Andrew Burden2, Shelby Judge2, Adedoyin Osinloye2, Claudia Minici3, Massimo Degano3, Matthew Robinson2, Paul Kline4.   

Abstract

A non-specific nucleoside hydrolase from Escherichia coli (RihC) has been cloned, overexpressed, and purified to greater than 95% homogeneity. Size exclusion chromatography and sodium dodecyl sulfate polyacrylamide gel electrophoresis show that the protein exists as a homodimer. The enzyme showed significant activity against the standard ribonucleosides with uridine, xanthosine, and inosine having the greatest activity. The Michaelis constants were relatively constant for uridine, cytidine, inosine, adenosine, xanthosine, and ribothymidine at approximately 480μM. No activity was exhibited against 2'-OH and 3'-OH deoxynucleosides. Nucleosides in which additional groups have been added to the exocyclic N6 amino group also exhibited no activity. Nucleosides lacking the 5'-OH group or with the 2'-OH group in the arabino configuration exhibited greatly reduced activity. Purine nucleosides and pyrimidine nucleosides in which the N7 or N3 nitrogens respectively were replaced with carbon also had no activity.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Escherichia coli; Nucleoside hydrolase; RihC

Mesh:

Substances:

Year:  2014        PMID: 24473221     DOI: 10.1016/j.bbapap.2014.01.010

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  5 in total

1.  Structural and biochemical characterization of the nucleoside hydrolase from C. elegans reveals the role of two active site cysteine residues in catalysis.

Authors:  Ranjan Kumar Singh; Jan Steyaert; Wim Versées
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2.  Structural explanation for the tunable substrate specificity of an E. coli nucleoside hydrolase: insights from molecular dynamics simulations.

Authors:  Stefan A P Lenz; Stacey D Wetmore
Journal:  J Comput Aided Mol Des       Date:  2018-11-26       Impact factor: 3.686

Review 3.  Structure, Oligomerization and Activity Modulation in N-Ribohydrolases.

Authors:  Massimo Degano
Journal:  Int J Mol Sci       Date:  2022-02-25       Impact factor: 5.923

4.  Process study of ceramic membrane-coupled mixed-cell fermentation for the production of adenine.

Authors:  Pengjie Sun; Changgeng Li; Yu Gong; Jinduo Wang; Qingyang Xu
Journal:  Front Bioeng Biotechnol       Date:  2022-08-10

5.  Production of a polyclonal antibody against inosine-uridine preferring nucleoside hydrolase of Acanthamoeba castellanii and its access to diagnosis of Acanthamoeba keratitis.

Authors:  So-Min Park; Hae-Ahm Lee; Ki-Back Chu; Fu-Shi Quan; Su-Jung Kim; Eun-Kyung Moon
Journal:  PLoS One       Date:  2020-09-30       Impact factor: 3.240

  5 in total

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