Literature DB >> 24470545

Analysis of IDH mutation, 1p/19q deletion, and PTEN loss delineates prognosis in clinical low-grade diffuse gliomas.

Nesrin Sabha, Christiane B Knobbe, Majula Maganti, Soha Al Omar, Mark Bernstein, Rob Cairns, Besmira Çako, Andreas von Deimling, David Capper, Tak W Mak, Tim-Rasmus Kiehl, Philippe Carvalho, Evelyn Garrett, Arie Perry, Gelareh Zadeh, Abhijit Guha.   

Abstract

BACKGROUND: Grades II and III gliomas have unpredictable rates of progression, making management decisions difficult. Currently, several clinical and radiological characteristics are utilized to predict progression and survival but collectively are suboptimal.
METHODS: In this study, we analyzed a set of 108 nonenhancing hemispheric grade II-III gliomas. Demographic variables, including patient age, tumor diameter, extent of resection, and performance status, were combined with molecular data (IDH mutation status [mIDH], 1p/19q codeletion, PTEN deletion, and EGFR amplification). A complete dataset for all variables was compiled for 70 of the 108 patients. Both univariable and multivariable analyses were performed to determine whether the molecular data singly or in combination offer advantages over tumor type and grade for prediction of overall survival (OS) and/or progression-free rate (PFR).
RESULTS: Patient age, clinical variables (tumor diameter, extent of resection, performance status), and pathology (tumor type and grade) were not predictive of OS or PFR. IDH mutation status alone was predictive of longer OS and PFR for the entire group of tumors; 1p/19q deletion alone was predictive of OS but not PFR. In the multivariable analysis, none of the clinical or demographic factors were predictive of OS or PFR. IDH mutation status, 1p/19q codeletion, and PTEN deletion were predictive of OS (P = .003, P = .005, P = .02, respectively). Both mIDH (P < .001) and the interaction term of 1p/19q and PTEN (P < .001) were found to be predictive of PFR.
CONCLUSIONS: We conclude that the combination of mIDH, 1p/19q codeletion, and PTEN deletion may be particularly effective in discriminating good prognosis from poor prognosis hemispheric gliomas. We propose that such a scheme merits testing on larger prospective cohorts. Should our findings be confirmed, routine clinical analysis of hemispheric gliomas for mIDH, 1p/19q codeletion, and PTEN deletion would be justified.

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Year:  2014        PMID: 24470545      PMCID: PMC4057130          DOI: 10.1093/neuonc/not299

Source DB:  PubMed          Journal:  Neuro Oncol        ISSN: 1522-8517            Impact factor:   12.300


  26 in total

Review 1.  Molecular genetic analysis of oligodendroglial tumors.

Authors:  Christian Hartmann; Wolf Mueller; Ulrike Lass; Suzanne Kamel-Reid; Andreas von Deimling
Journal:  J Neuropathol Exp Neurol       Date:  2005-01       Impact factor: 3.685

2.  Malignant gliomas with primitive neuroectodermal tumor-like components: a clinicopathologic and genetic study of 53 cases.

Authors:  Arie Perry; C Ryan Miller; Meena Gujrati; Bernd W Scheithauer; Sandro Casavilca Zambrano; Sarah C Jost; Ravi Raghavan; Jiang Qian; Elizabeth J Cochran; Jason T Huse; Eric C Holland; Peter C Burger; Marc K Rosenblum
Journal:  Brain Pathol       Date:  2008-04-29       Impact factor: 6.508

3.  Multiinstitutional validation of the University of California at San Francisco Low-Grade Glioma Prognostic Scoring System. Clinical article.

Authors:  Edward F Chang; Aaron Clark; Randy L Jensen; Mark Bernstein; Abhijit Guha; Giorgio Carrabba; Debabrata Mukhopadhyay; Won Kim; Linda M Liau; Susan M Chang; Justin S Smith; Mitchel S Berger; Michael W McDermott
Journal:  J Neurosurg       Date:  2009-08       Impact factor: 5.115

4.  Subsets of glioblastoma multiforme defined by molecular genetic analysis.

Authors:  A von Deimling; K von Ammon; D Schoenfeld; O D Wiestler; B R Seizinger; D N Louis
Journal:  Brain Pathol       Date:  1993-01       Impact factor: 6.508

5.  Specific genetic predictors of chemotherapeutic response and survival in patients with anaplastic oligodendrogliomas.

Authors:  J G Cairncross; K Ueki; M C Zlatescu; D K Lisle; D M Finkelstein; R R Hammond; J S Silver; P C Stark; D R Macdonald; Y Ino; D A Ramsay; D N Louis
Journal:  J Natl Cancer Inst       Date:  1998-10-07       Impact factor: 13.506

6.  An integrated genomic analysis of human glioblastoma multiforme.

Authors:  D Williams Parsons; Siân Jones; Xiaosong Zhang; Jimmy Cheng-Ho Lin; Rebecca J Leary; Philipp Angenendt; Parminder Mankoo; Hannah Carter; I-Mei Siu; Gary L Gallia; Alessandro Olivi; Roger McLendon; B Ahmed Rasheed; Stephen Keir; Tatiana Nikolskaya; Yuri Nikolsky; Dana A Busam; Hanna Tekleab; Luis A Diaz; James Hartigan; Doug R Smith; Robert L Strausberg; Suely Kazue Nagahashi Marie; Sueli Mieko Oba Shinjo; Hai Yan; Gregory J Riggins; Darell D Bigner; Rachel Karchin; Nick Papadopoulos; Giovanni Parmigiani; Bert Vogelstein; Victor E Velculescu; Kenneth W Kinzler
Journal:  Science       Date:  2008-09-04       Impact factor: 47.728

7.  IDH mutation and neuroglial developmental features define clinically distinct subclasses of lower grade diffuse astrocytic glioma.

Authors:  Daniel Gorovets; Kasthuri Kannan; Ronglai Shen; Edward R Kastenhuber; Nasrin Islamdoust; Carl Campos; Elena Pentsova; Adriana Heguy; Suresh C Jhanwar; Ingo K Mellinghoff; Timothy A Chan; Jason T Huse
Journal:  Clin Cancer Res       Date:  2012-03-13       Impact factor: 13.801

8.  IDH1 mutations are present in the majority of common adult gliomas but rare in primary glioblastomas.

Authors:  Koichi Ichimura; Danita M Pearson; Sylvia Kocialkowski; L Magnus Bäcklund; Raymond Chan; David T W Jones; V Peter Collins
Journal:  Neuro Oncol       Date:  2009-05-12       Impact factor: 12.300

9.  IDH1 and IDH2 mutations in gliomas.

Authors:  Hai Yan; D Williams Parsons; Genglin Jin; Roger McLendon; B Ahmed Rasheed; Weishi Yuan; Ivan Kos; Ines Batinic-Haberle; Siân Jones; Gregory J Riggins; Henry Friedman; Allan Friedman; David Reardon; James Herndon; Kenneth W Kinzler; Victor E Velculescu; Bert Vogelstein; Darell D Bigner
Journal:  N Engl J Med       Date:  2009-02-19       Impact factor: 176.079

Review 10.  The 2007 WHO classification of tumours of the central nervous system.

Authors:  David N Louis; Hiroko Ohgaki; Otmar D Wiestler; Webster K Cavenee; Peter C Burger; Anne Jouvet; Bernd W Scheithauer; Paul Kleihues
Journal:  Acta Neuropathol       Date:  2007-07-06       Impact factor: 17.088

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  27 in total

1.  CNS Anticancer Drug Discovery and Development Conference White Paper.

Authors:  Victor A Levin; Peter J Tonge; James M Gallo; Marc R Birtwistle; Arvin C Dar; Antonio Iavarone; Patrick J Paddison; Timothy P Heffron; William F Elmquist; Jean E Lachowicz; Ted W Johnson; Forest M White; Joohee Sul; Quentin R Smith; Wang Shen; Jann N Sarkaria; Ramakrishna Samala; Patrick Y Wen; Donald A Berry; Russell C Petter
Journal:  Neuro Oncol       Date:  2015-11       Impact factor: 12.300

Review 2.  The evolving molecular genetics of low-grade glioma.

Authors:  Sriram Venneti; Jason T Huse
Journal:  Adv Anat Pathol       Date:  2015-03       Impact factor: 3.875

3.  Low preoperative prognostic nutritional index predicts poor survival in patients with newly diagnosed high-grade gliomas.

Authors:  Zhen-Qiang He; Chao Ke; Fuad Al-Nahari; Hao Duan; Cheng-Cheng Guo; Yang Wang; Xiang-Heng Zhang; Yin-Sheng Chen; Zhi-Gang Liu; Jian Wang; Zhong-Ping Chen; Xiao-Bing Jiang; Yong-Gao Mou
Journal:  J Neurooncol       Date:  2017-01-11       Impact factor: 4.130

Review 4.  'Low grade glioma': an update for radiologists.

Authors:  Jennifer Larsen; Steve B Wharton; Fiona McKevitt; Charles Romanowski; Caroline Bridgewater; Hesham Zaki; Nigel Hoggard
Journal:  Br J Radiol       Date:  2016-12-07       Impact factor: 3.039

5.  Editorial commentary on "Analysis of IDH mutation, 1p19q deletion, and PTEN loss delineates prognosis in clinical low-grade gliomas".

Authors:  Robert B Jenkins
Journal:  Neuro Oncol       Date:  2014-07       Impact factor: 12.300

6.  Clinical significance of chromosome 1p/19q loss of heterozygosity and Sox17 expression in oligodendrogliomas.

Authors:  Junzhi Li; Na Miao; Ming Liu; Wenli Cui; Xia Liu; Xinxia Li; Xiaoli Shi; Song Qing; Yuqing Ma; Wei Zhang; Hadeti Biekemituofu
Journal:  Int J Clin Exp Pathol       Date:  2014-12-01

7.  IDH1 mutation is prognostic for diffuse astrocytoma but not low-grade oligodendrogliomas in patients not treated with early radiotherapy.

Authors:  Yasuo Iwadate; Tomoo Matsutani; Seiichiro Hirono; Shiro Ikegami; Natsuki Shinozaki; Naokatsu Saeki
Journal:  J Neurooncol       Date:  2015-08-05       Impact factor: 4.130

Review 8.  2-Hydoxyglutarate: D/Riving Pathology in gLiomaS.

Authors:  Daniel R Wahl; Sriram Venneti
Journal:  Brain Pathol       Date:  2015-11       Impact factor: 6.508

9.  Big data visualization identifies the multidimensional molecular landscape of human gliomas.

Authors:  Hamid Bolouri; Lue Ping Zhao; Eric C Holland
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-26       Impact factor: 11.205

10.  Comprehensive Molecular Analyses of a Novel Mutational Signature Classification System with Regard to Prognosis, Genomic Alterations, and Immune Landscape in Glioma.

Authors:  Zaoqu Liu; Taoyuan Lu; Libo Wang; Long Liu; Lifeng Li; Xinwei Han
Journal:  Front Mol Biosci       Date:  2021-07-07
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