| Literature DB >> 24467305 |
A S Madhun1, E Karlsbakk, C H Isachsen, L M Omdal, A G Eide Sørvik, Ø Skaala, B T Barlaup, K A Glover.
Abstract
The role of escaped farmed salmon in spreading infectious agents from aquaculture to wild salmonid populations is largely unknown. This is a case study of potential disease interaction between escaped farmed and wild fish populations. In summer 2012, significant numbers of farmed Atlantic salmon were captured in the Hardangerfjord and in a local river. Genetic analyses of 59 of the escaped salmon and samples collected from six local salmon farms pointed out the most likely source farm, but two other farms had an overlapping genetic profile. The escapees were also analysed for three viruses that are prevalent in fish farming in Norway. Almost all the escaped salmon were infected with salmon alphavirus (SAV) and piscine reovirus (PRV). To use the infection profile to assist genetic methods in identifying the likely farm of origin, samples from the farms were also tested for these viruses. However, in the current case, all the three farms had an infection profile that was similar to that of the escapees. We have shown that double-virus-infected escaped salmon ascend a river close to the likely source farms, reinforcing the potential for spread of viruses to wild salmonids.Entities:
Keywords: aquaculture; escapees; piscine reovirus; salmon alphavirus; virus transmission
Mesh:
Year: 2014 PMID: 24467305 PMCID: PMC4303929 DOI: 10.1111/jfd.12228
Source DB: PubMed Journal: J Fish Dis ISSN: 0140-7775 Impact factor: 2.767
Figure 1Map showing the sites where escaped salmon where captured. The date of capture and the number of fish (in brackets) are also shown. The locations of suspected farms were kept anonymous.
Samples collected from the local salmon farms
| Source | Date | Organ tested by PCR | Organs used for histopathology |
|---|---|---|---|
| Farm 2 | 07.09.2012 | Heart | Heart, pancreas, kidney, gill, muscles |
| Farm 4 | 13.07.2012 | Kidney | Heart, pancreas, lever, kidney, spleen, gill |
| Farm 6 | 19.07.2012 | Heart | Heart, pancreas, lever, kidney, spleen, gill, muscles |
Figure 2Bayesian cluster analysis depicting the genetic relationship between fish from each of the 14 baseline samples and the 58 escapees. Each vertical line represents an individual, and each colour a genetic cluster. An individual can be a mixture of genetic clusters. The results are presented for four genetic clusters. Results from other numbers of genetic clusters gave similar results (not presented). 1–47 = farm 1A, 48–94 = 1B, 95–141 = 1C, 142–188 = 2A, 199–232 = 3A, 233–271 = 3B, 272–318 = 3C, 319–365 = 3D, 366–390 = 4A, 391–415 = 4B, 416–462 = 5A, 463–509 = 5B, 510–556 = 6A, 557–602 = 6B, 603–660 = escapees.
Figure 3Assignment and exclusion of the farmed escapees. Upper panel = direct assignment of the escapees to each of the baseline samples, middle panel = number of escapees that can be rejected from each baseline sampleP < 0.05, bottom panel = number of escapees that excluded from each baseline sample atP < 0.001. Note that the bottom two panels will not add up to 58 due to the fact that in theory each escapee can be rejected from all sources while the upper panel adds up to 58.
The numbers of tested salmon and the results of virus testing
| Virus | Escapees Heart (−20 °C) | Farm 2 Heart (RNA later) N 9 | Farm 4 Kidney (RNA later) N 8 | Farm 6 Heart (RNA later) N 7 | ||
|---|---|---|---|---|---|---|
| All N 58 | River N 20 | Sea N 38 | ||||
| SAV + mean | 57 | 19 | 38 | 8 | 7 | 7 |
| 26.2 (20.7–31.1) | 26.9 (24.7–29.7) | 25.9 (20.7–31.1) | 23.3 (19.0–35.0) | 33.2 (31.1–37.4) | 24.5 (20.6–29.7) | |
| PRV + mean | 58 | 20 | 38 | 8 | 8 | 6 |
| 28.3 (21.5–34.9) | 28.5 (24.8–34.5) | 28.2 (21.5–34.9) | 32.8 (30.8–36.1) | 31.0 (28.9–34.2) | 33.5 (31.7–36.5) | |
| PMCV + | 0 | 0 | 0 | 0 | ||