Literature DB >> 24465155

Comparison of nanowire pellicles for plasma membrane enrichment: coating nanowires on cell.

Sung-Kyoung Kim1, Rebecca Rose1, Waeowalee Choksawangkarn1, Lauren Graham1, Junkai Hu1, Catherine Fenselau1, Sang Bok Lee2.   

Abstract

A study is reported on the effect of nanowire density on the ease of pellicle formation and the enrichment of plasma membrane proteins for analysis by mass spectrometry. An optimized synthesis is reported for iron silicate nanowires with a narrow size range of 900 ±400 nm in length and 200 nm diameter. The nanowires were coated with Al2O3 and used to form pellicles around suspended multiple myeloma cells, which acted as a model for cells recovered from tissue samples. Lighter alumina-coated silica nanowires were also synthesized (Kim et al. 2013), which allowed a comparison of the construction of the two pellicles and of the effect of nanowire density on plasma membrane enrichment. Evidence is offered that the dense nanowire pellicle does not crush or distort these mammalian cells. Finally, the pellicles were incorporated into a mass-spectrometry-based proteomic workflow to analyze transmembrane proteins in the plasma membrane. In contrast to a prior comparison of the effect of density with nanoparticles pellicles (Choksawangkarn et al. 2013), nanowire density was not found to significantly affect the enrichment of the plasma membrane. However, nanowires with a favorable aspect for pellicle formation are more easily and reliably produced with iron silicate than with silica. Additionally, the method for pellicle formation was optimized through the use of iron silicate nanowires (ISNW), which is crucial to the improvement of PM protein enrichment and analysis.

Entities:  

Keywords:  Plasma membrane enrichment; iron silicate nanowires; nanowire cell coating; nanowire pellicles; silica nanowires

Year:  2013        PMID: 24465155      PMCID: PMC3899839          DOI: 10.1007/s11051-013-2133-0

Source DB:  PubMed          Journal:  J Nanopart Res        ISSN: 1388-0764            Impact factor:   2.253


  16 in total

Review 1.  The application of mass spectrometry to membrane proteomics.

Authors:  Christine C Wu; John R Yates
Journal:  Nat Biotechnol       Date:  2003-03       Impact factor: 54.908

2.  Integration of Jacobson's pellicle method into proteomic strategies for plasma membrane proteins.

Authors:  Amir M Rahbar; Catherine Fenselau
Journal:  J Proteome Res       Date:  2004 Nov-Dec       Impact factor: 4.466

Review 3.  How many drug targets are there?

Authors:  John P Overington; Bissan Al-Lazikani; Andrew L Hopkins
Journal:  Nat Rev Drug Discov       Date:  2006-12       Impact factor: 84.694

Review 4.  Proteomics of integral membrane proteins--theory and application.

Authors:  Anna E Speers; Christine C Wu
Journal:  Chem Rev       Date:  2007-08       Impact factor: 60.622

5.  Coating cells with cationic silica-magnetite nanocomposites for rapid purification of integral plasma membrane proteins.

Authors:  Wei Zhang; Chao Zhao; Sheng Wang; Caiyun Fang; Yawei Xu; Haojie Lu; Pengyuan Yang
Journal:  Proteomics       Date:  2011-07-21       Impact factor: 3.984

6.  Quantitative proteomic analysis of the adipocyte plasma membrane.

Authors:  Matthew J Prior; Mark Larance; Robert T Lawrence; Jamie Soul; Sean Humphrey; James Burchfield; Carol Kistler; Jonathon R Davey; Penelope J La-Borde; Michael Buckley; Hiroshi Kanazawa; Robert G Parton; Michael Guilhaus; David E James
Journal:  J Proteome Res       Date:  2011-10-18       Impact factor: 4.466

7.  Nanowire pellicles for eukaryotic cells: nanowire coating and interaction with cells.

Authors:  Sung-Kyoung Kim; Waeowalee Choksawangkarn; Rebecca Rose; Catherine Fenselau; Sang Bok Lee
Journal:  Nanomedicine (Lond)       Date:  2013-07-31       Impact factor: 5.307

8.  Enrichment of plasma membrane proteins using nanoparticle pellicles: comparison between silica and higher density nanoparticles.

Authors:  Waeowalee Choksawangkarn; Sung-Kyoung Kim; Joe R Cannon; Nathan J Edwards; Sang Bok Lee; Catherine Fenselau
Journal:  J Proteome Res       Date:  2013-01-31       Impact factor: 4.466

9.  Evaluation of two cell surface modification methods for proteomic analysis of plasma membrane from isolated mouse hepatocytes.

Authors:  Xuanwen Li; Qihui Jin; Jia Cao; Chunliang Xie; Rui Cao; Zhen Liu; Jixian Xiong; Jianglin Li; Xiaoxu Yang; Ping Chen; Songping Liang
Journal:  Biochim Biophys Acta       Date:  2008-07-28

10.  Coating cells with colloidal silica for high yield isolation of plasma membrane sheets and identification of transmembrane proteins.

Authors:  L K Chaney; B S Jacobson
Journal:  J Biol Chem       Date:  1983-08-25       Impact factor: 5.157

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