Literature DB >> 24463715

Role of transcription and enzyme activities in redistribution of carbon and electron flux in response to N₂ and H₂ sparging of open-batch cultures of Clostridium thermocellum ATCC 27405.

Carlo R Carere1, Thomas Rydzak, Nazim Cicek, David B Levin, Richard Sparling.   

Abstract

Growth, end-product synthesis, enzyme activities, and transcription of select genes associated with the "malate shunt," pyruvate catabolism, H2 synthesis, and ethanol production were studied in the cellulolytic anaerobe, Clostridium thermocellum ATCC 27405, during open-batch fermentation of cellobiose to determine the effect of elevated N2 and H2 gas sparging on metabolism using a 14-L fermenter with a 7-L working volume. The metabolic shift from acetate, H2, and CO2 to ethanol and formate in response to high H2 versus high N2 sparging (20 mL s(-1)) was accompanied by (a) a 2-fold increase in nicotinamide adenine dinucleotide (NADH)-dependent alcohol dehydrogenase (Adh) activity, (b) a 10-fold increase in adhE transcription, and (c) a 3-fold decrease in adhZ transcription. A similar, but less pronounced, metabolic shift was also observed when the rate of N2 sparging was decreased from 20 to 2 mL s(-1), during which (a) NADH-dependent ADH and pyruvate: ferredoxin oxidoreductase (PFOR) activities increased by ∼1.5-fold, (b) adhY transcription increased 6-fold, and (c) transcription of selected pfor genes increased 2-fold. Here we demonstrate that transcription of genes involved in ethanol metabolism is tightly regulated in response to gas sparging. We discuss the potential impacts of dissolved H2 on electron carrier (NADH, NADPH, ferredoxin) oxidation and how these electron carriers can redirect carbon and electron flux and regulate adhE transcription.

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Year:  2014        PMID: 24463715     DOI: 10.1007/s00253-013-5500-y

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  5 in total

1.  Elimination of formate production in Clostridium thermocellum.

Authors:  Thomas Rydzak; Lee R Lynd; Adam M Guss
Journal:  J Ind Microbiol Biotechnol       Date:  2015-07-11       Impact factor: 3.346

2.  Assessment of metabolic flux distribution in the thermophilic hydrogen producer Caloramator celer as affected by external pH and hydrogen partial pressure.

Authors:  Alessandro Ciranna; Sudhanshu S Pawar; Ville Santala; Matti Karp; Ed W J van Niel
Journal:  Microb Cell Fact       Date:  2014-03-28       Impact factor: 5.328

3.  Exploring complex cellular phenotypes and model-guided strain design with a novel genome-scale metabolic model of Clostridium thermocellum DSM 1313 implementing an adjustable cellulosome.

Authors:  R Adam Thompson; Sanjeev Dahal; Sergio Garcia; Intawat Nookaew; Cong T Trinh
Journal:  Biotechnol Biofuels       Date:  2016-09-06       Impact factor: 6.040

4.  Clostridium thermocellum DSM 1313 transcriptional responses to redox perturbation.

Authors:  Kyle Sander; Charlotte M Wilson; Miguel Rodriguez; Dawn M Klingeman; Thomas Rydzak; Brian H Davison; Steven D Brown
Journal:  Biotechnol Biofuels       Date:  2015-12-12       Impact factor: 6.040

5.  Transcriptomic analysis of a Clostridium thermocellum strain engineered to utilize xylose: responses to xylose versus cellobiose feeding.

Authors:  Albert E Tafur Rangel; Trevor Croft; Andrés Fernando González Barrios; Luis H Reyes; Pin-Ching Maness; Katherine J Chou
Journal:  Sci Rep       Date:  2020-09-03       Impact factor: 4.996

  5 in total

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