Literature DB >> 24461351

Predicting the molecular interactions of CRIP1a-cannabinoid 1 receptor with integrated molecular modeling approaches.

Mostafa H Ahmed1, Glen E Kellogg2, Dana E Selley3, Martin K Safo1, Yan Zhang4.   

Abstract

Cannabinoid receptors are a family of G-protein coupled receptors that are involved in a wide variety of physiological processes and diseases. One of the key regulators that are unique to cannabinoid receptors is the cannabinoid receptor interacting proteins (CRIPs). Among them CRIP1a was found to decrease the constitutive activity of the cannabinoid type-1 receptor (CB1R). The aim of this study is to gain an understanding of the interaction between CRIP1a and CB1R through using different computational techniques. The generated model demonstrated several key putative interactions between CRIP1a and CB1R, including the critical involvement of Lys130 in CRIP1a. Published by Elsevier Ltd.

Entities:  

Keywords:  CB(1)R; CRIP1a; Cannabinoid receptor; Protein threading; Protein–protein docking

Mesh:

Substances:

Year:  2014        PMID: 24461351      PMCID: PMC4353595          DOI: 10.1016/j.bmcl.2013.12.119

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  84 in total

1.  GeneSilico protein structure prediction meta-server.

Authors:  Michal A Kurowski; Janusz M Bujnicki
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

2.  COMA server for protein distant homology search.

Authors:  Mindaugas Margelevicius; Mindaugas Laganeckas; Ceslovas Venclovas
Journal:  Bioinformatics       Date:  2010-06-06       Impact factor: 6.937

3.  A probabilistic and continuous model of protein conformational space for template-free modeling.

Authors:  Feng Zhao; Jian Peng; Joe Debartolo; Karl F Freed; Tobin R Sosnick; Jinbo Xu
Journal:  J Comput Biol       Date:  2010-06       Impact factor: 1.479

4.  Porter: a new, accurate server for protein secondary structure prediction.

Authors:  Gianluca Pollastri; Aoife McLysaght
Journal:  Bioinformatics       Date:  2004-12-07       Impact factor: 6.937

5.  pGenTHREADER and pDomTHREADER: new methods for improved protein fold recognition and superfamily discrimination.

Authors:  Anna Lobley; Michael I Sadowski; David T Jones
Journal:  Bioinformatics       Date:  2009-05-07       Impact factor: 6.937

6.  Protein structure prediction on the Web: a case study using the Phyre server.

Authors:  Lawrence A Kelley; Michael J E Sternberg
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

7.  Downregulation of the CB1 cannabinoid receptor and related molecular elements of the endocannabinoid system in epileptic human hippocampus.

Authors:  Anikó Ludányi; Loránd Eross; Sándor Czirják; János Vajda; Péter Halász; Masahiko Watanabe; Miklós Palkovits; Zsófia Maglóczky; Tamás F Freund; István Katona
Journal:  J Neurosci       Date:  2008-03-19       Impact factor: 6.167

8.  CB1 cannabinoid receptor activity is modulated by the cannabinoid receptor interacting protein CRIP 1a.

Authors:  Jason L Niehaus; Yunguang Liu; Kathleen T Wallis; Michaela Egertová; Sheela G Bhartur; Somnath Mukhopadhyay; Shanping Shi; Hengjun He; Dana E Selley; Allyn C Howlett; Maurice R Elphick; Deborah L Lewis
Journal:  Mol Pharmacol       Date:  2007-09-25       Impact factor: 4.436

9.  Energetics of the protein-DNA-water interaction.

Authors:  Francesca Spyrakis; Pietro Cozzini; Chiara Bertoli; Anna Marabotti; Glen E Kellogg; Andrea Mozzarelli
Journal:  BMC Struct Biol       Date:  2007-01-10

10.  LOMETS: a local meta-threading-server for protein structure prediction.

Authors:  Sitao Wu; Yang Zhang
Journal:  Nucleic Acids Res       Date:  2007-05-03       Impact factor: 16.971

View more
  7 in total

1.  Molecular Interaction between Distal C-Terminal Domain of the CB1 Cannabinoid Receptor and Cannabinoid Receptor Interacting Proteins (CRIP1a/CRIP1b).

Authors:  Pratishtha Singh; Anjali Ganjiwale; Allyn C Howlett; Sudha M Cowsik
Journal:  J Chem Inf Model       Date:  2019-12-10       Impact factor: 4.956

2.  In silico interaction analysis of cannabinoid receptor interacting protein 1b (CRIP1b) - CB1 cannabinoid receptor.

Authors:  Pratishtha Singh; Anjali Ganjiwale; Allyn C Howlett; Sudha M Cowsik
Journal:  J Mol Graph Model       Date:  2017-09-06       Impact factor: 2.518

3.  Cannabinoid Receptor Interacting Protein 1a Competition with β-Arrestin for CB1 Receptor Binding Sites.

Authors:  Lawrence C Blume; Theresa Patten; Khalil Eldeeb; Sandra Leone-Kabler; Alexander A Ilyasov; Bradley M Keegan; Jeremy E O'Neal; Caroline E Bass; Roy R Hantgan; W Todd Lowther; Dana E Selley; A Llyn C Howlett
Journal:  Mol Pharmacol       Date:  2016-11-28       Impact factor: 4.436

Review 4.  Role of the endocannabinoid system in vertebrates: Emphasis on the zebrafish model.

Authors:  Francesca Oltrabella; Adam Melgoza; Brian Nguyen; Su Guo
Journal:  Dev Growth Differ       Date:  2017-05-17       Impact factor: 2.053

5.  Peptide/Receptor Co-evolution Explains the Lipolytic Function of the Neuropeptide TLQP-21.

Authors:  Bhavani S Sahu; Pedro Rodriguez; Megin E Nguyen; Ruijun Han; Cheryl Cero; Maria Razzoli; Paolo Piaggi; Lauren J Laskowski; Mihaela Pavlicev; Louis Muglia; Sushil K Mahata; Scott O'Grady; John D McCorvy; Leslie J Baier; Yuk Y Sham; Alessandro Bartolomucci
Journal:  Cell Rep       Date:  2019-09-03       Impact factor: 9.423

Review 6.  Cannabinoid Receptor Interacting Protein 1a (CRIP1a): Function and Structure.

Authors:  William T Booth; Noah B Walker; W Todd Lowther; Allyn C Howlett
Journal:  Molecules       Date:  2019-10-12       Impact factor: 4.411

7.  Design and validation of recombinant protein standards for quantitative Western blot analysis of cannabinoid CB1 receptor density in cell membranes: an alternative to radioligand binding methods.

Authors:  Miquel Saumell-Esnaola; Ainhoa Elejaga-Jimeno; Leyre Echeazarra; Leire Borrega-Román; Sergio Barrondo; Maider López de Jesús; Imanol González-Burguera; Alberto Gómez-Caballero; María Aranzazu Goicolea; Joan Sallés; Gontzal García Del Caño
Journal:  Microb Cell Fact       Date:  2022-09-15       Impact factor: 6.352

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.