| Literature DB >> 24454154 |
Tushar S Basu Baul1, Imliwati Longkumer1, Seik Weng Ng2, Edward R T Tiekink3.
Abstract
The title dimethyl sulfoxide solvate, [Hg2(C12H9ClN2)I2]·C2H6OS, features tetra-hedrally and linearly coordinated Hg(II) atoms. The distorted tetrahedral coordination sphere is defined by chelating N atoms that define an acute angle [69.6 (3)°] and two I atoms that form a wide angle [142.80 (4)°]. The linearly coordinated Hg(II) atom [177.0 (4)°] exists with a donor set defined by C and Cl atoms. Secondary inter-actions are apparent in the crystal packing with the tetra-hedrally and linearly coordinated Hg(II) atoms expanding their coordination environments by forming weak Hg⋯I [3.772 (7) Å] and Hg⋯O [2.921 (12) Å] inter-actions, respectively. Mercury-containing mol-ecules stack along the a axis, are connected by π-π inter-actions [inter-centroid distance between pyridine and benzene rings = 3.772 (7) Å] and define channels in which the dimethyl sulfoxide mol-ecules reside. The latter are connected by the aforementioned Hg⋯O inter-actions as well as C-H⋯I and C-H⋯O inter-actions, resulting in a three-dimensional architecture.Entities:
Year: 2013 PMID: 24454154 PMCID: PMC3884979 DOI: 10.1107/S1600536813029693
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Hg2(C12H9ClN2)I2]·C2H6OS | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3179 reflections | |
| θ = 2.9–27.5° | |
| µ = 17.76 mm−1 | |
| α = 70.030 (6)° | |
| β = 76.779 (5)° | Prism, yellow |
| γ = 79.362 (6)° | 0.20 × 0.10 × 0.04 mm |
| Agilent SuperNova Dual diffractometer with an Atlas detector | 4848 independent reflections |
| Radiation source: SuperNova (Mo) X-ray Source | 3470 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 27.6°, θmin = 2.9° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 12862 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4848 reflections | (Δ/σ)max < 0.001 |
| 208 parameters | Δρmax = 4.40 e Å−3 |
| 0 restraints | Δρmin = −1.45 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Hg1 | 0.20510 (6) | 0.31203 (6) | 0.05498 (4) | 0.05488 (18) | |
| Hg2 | 0.86627 (6) | 0.16239 (6) | 0.39910 (4) | 0.05315 (17) | |
| I1 | 0.45868 (12) | 0.28767 (13) | −0.09397 (7) | 0.0740 (3) | |
| I2 | 0.03457 (13) | 0.49555 (11) | 0.15600 (8) | 0.0681 (3) | |
| Cl1 | 1.0870 (4) | 0.1770 (4) | 0.4659 (3) | 0.0679 (10) | |
| S1 | 0.7709 (5) | 0.4377 (4) | 0.5467 (3) | 0.0681 (10) | |
| O1 | 0.6835 (13) | 0.3252 (12) | 0.5397 (10) | 0.083 (3) | |
| N1 | 0.0365 (11) | 0.1207 (10) | 0.1108 (6) | 0.040 (2) | |
| N2 | 0.2980 (10) | 0.1073 (11) | 0.2044 (7) | 0.041 (2) | |
| C1 | −0.0913 (14) | 0.1244 (14) | 0.0724 (9) | 0.047 (3) | |
| H1 | −0.1221 | 0.2088 | 0.0207 | 0.057* | |
| C2 | −0.1844 (13) | 0.0080 (15) | 0.1050 (9) | 0.046 (3) | |
| H2 | −0.2765 | 0.0153 | 0.0777 | 0.056* | |
| C3 | −0.1338 (15) | −0.1155 (16) | 0.1780 (10) | 0.054 (3) | |
| H3 | −0.1900 | −0.1963 | 0.2004 | 0.065* | |
| C4 | −0.0009 (14) | −0.1216 (14) | 0.2188 (10) | 0.052 (3) | |
| H4 | 0.0327 | −0.2057 | 0.2698 | 0.063* | |
| C5 | 0.0836 (12) | −0.0018 (12) | 0.1837 (7) | 0.036 (2) | |
| C6 | 0.2212 (13) | −0.0050 (14) | 0.2305 (9) | 0.046 (3) | |
| H6 | 0.2548 | −0.0902 | 0.2806 | 0.056* | |
| C7 | 0.4272 (13) | 0.1129 (13) | 0.2514 (8) | 0.039 (2) | |
| C8 | 0.4834 (14) | −0.0020 (15) | 0.3326 (9) | 0.048 (3) | |
| H8 | 0.4374 | −0.0889 | 0.3593 | 0.058* | |
| C9 | 0.6106 (14) | 0.0163 (16) | 0.3731 (9) | 0.054 (3) | |
| H9 | 0.6495 | −0.0600 | 0.4272 | 0.065* | |
| C10 | 0.6798 (13) | 0.1435 (14) | 0.3355 (9) | 0.043 (3) | |
| C11 | 0.6269 (15) | 0.2541 (14) | 0.2524 (10) | 0.050 (3) | |
| H11 | 0.6760 | 0.3393 | 0.2234 | 0.060* | |
| C12 | 0.4978 (16) | 0.2369 (13) | 0.2117 (10) | 0.050 (3) | |
| H12 | 0.4605 | 0.3124 | 0.1565 | 0.060* | |
| C13 | 0.632 (2) | 0.541 (2) | 0.6187 (12) | 0.092 (6) | |
| H13A | 0.6148 | 0.4852 | 0.6922 | 0.138* | |
| H13B | 0.5322 | 0.5648 | 0.5934 | 0.138* | |
| H13C | 0.6752 | 0.6289 | 0.6096 | 0.138* | |
| C14 | 0.774 (2) | 0.570 (2) | 0.4243 (12) | 0.093 (6) | |
| H14A | 0.8405 | 0.5315 | 0.3709 | 0.140* | |
| H14B | 0.8175 | 0.6531 | 0.4245 | 0.140* | |
| H14C | 0.6665 | 0.5984 | 0.4098 | 0.140* |
| Hg1 | 0.0592 (3) | 0.0483 (3) | 0.0548 (3) | −0.0123 (2) | −0.0089 (2) | −0.0109 (2) |
| Hg2 | 0.0496 (3) | 0.0575 (4) | 0.0632 (3) | −0.0044 (2) | −0.0222 (2) | −0.0257 (2) |
| I1 | 0.0623 (6) | 0.0922 (8) | 0.0572 (5) | −0.0182 (5) | 0.0016 (4) | −0.0137 (5) |
| I2 | 0.0842 (7) | 0.0544 (6) | 0.0677 (6) | 0.0013 (5) | −0.0185 (5) | −0.0232 (4) |
| Cl1 | 0.062 (2) | 0.064 (2) | 0.090 (2) | −0.0103 (17) | −0.0408 (18) | −0.0204 (19) |
| S1 | 0.068 (2) | 0.056 (2) | 0.084 (2) | −0.0134 (18) | −0.0129 (18) | −0.0236 (19) |
| O1 | 0.079 (7) | 0.053 (7) | 0.118 (9) | −0.012 (6) | −0.014 (6) | −0.030 (6) |
| N1 | 0.043 (5) | 0.039 (6) | 0.036 (4) | −0.007 (4) | −0.008 (4) | −0.008 (4) |
| N2 | 0.033 (5) | 0.040 (6) | 0.047 (5) | −0.006 (4) | −0.006 (4) | −0.010 (4) |
| C1 | 0.043 (6) | 0.044 (7) | 0.051 (6) | −0.005 (5) | −0.005 (5) | −0.012 (5) |
| C2 | 0.037 (6) | 0.061 (8) | 0.058 (7) | −0.001 (5) | −0.003 (5) | −0.046 (6) |
| C3 | 0.048 (7) | 0.054 (8) | 0.066 (8) | −0.024 (6) | −0.005 (6) | −0.019 (6) |
| C4 | 0.050 (7) | 0.042 (7) | 0.064 (8) | −0.010 (6) | −0.013 (6) | −0.012 (6) |
| C5 | 0.041 (6) | 0.040 (6) | 0.033 (5) | −0.014 (5) | −0.001 (4) | −0.016 (4) |
| C6 | 0.046 (6) | 0.045 (7) | 0.047 (6) | −0.013 (5) | −0.012 (5) | −0.008 (5) |
| C7 | 0.040 (6) | 0.036 (6) | 0.044 (6) | −0.005 (5) | −0.004 (4) | −0.018 (5) |
| C8 | 0.048 (7) | 0.054 (8) | 0.044 (6) | −0.015 (6) | −0.008 (5) | −0.013 (5) |
| C9 | 0.046 (7) | 0.066 (9) | 0.048 (6) | 0.003 (6) | −0.017 (5) | −0.015 (6) |
| C10 | 0.042 (6) | 0.047 (7) | 0.050 (6) | −0.004 (5) | −0.014 (5) | −0.025 (5) |
| C11 | 0.052 (7) | 0.036 (7) | 0.065 (7) | −0.008 (5) | −0.016 (6) | −0.016 (6) |
| C12 | 0.070 (8) | 0.027 (6) | 0.059 (7) | −0.008 (6) | −0.031 (6) | −0.007 (5) |
| C13 | 0.119 (15) | 0.087 (14) | 0.063 (9) | −0.042 (11) | 0.027 (9) | −0.028 (9) |
| C14 | 0.131 (15) | 0.085 (13) | 0.071 (10) | −0.061 (12) | 0.014 (9) | −0.029 (9) |
| Hg1—I1 | 2.6581 (11) | C4—H4 | 0.9300 |
| Hg1—I2 | 2.6684 (12) | C5—C6 | 1.458 (14) |
| Hg1—N1 | 2.395 (9) | C6—H6 | 0.9300 |
| Hg1—N2 | 2.493 (9) | C7—C12 | 1.350 (16) |
| Hg2—Cl1 | 2.330 (3) | C7—C8 | 1.391 (16) |
| Hg2—C10 | 2.052 (10) | C8—C9 | 1.396 (16) |
| S1—O1 | 1.485 (11) | C8—H8 | 0.9300 |
| S1—C14 | 1.734 (16) | C9—C10 | 1.370 (18) |
| S1—C13 | 1.766 (19) | C9—H9 | 0.9300 |
| N1—C1 | 1.310 (14) | C10—C11 | 1.375 (16) |
| N1—C5 | 1.340 (13) | C11—C12 | 1.408 (16) |
| N2—C6 | 1.293 (14) | C11—H11 | 0.9300 |
| N2—C7 | 1.421 (13) | C12—H12 | 0.9300 |
| C1—C2 | 1.405 (17) | C13—H13A | 0.9600 |
| C1—H1 | 0.9300 | C13—H13B | 0.9600 |
| C2—C3 | 1.356 (18) | C13—H13C | 0.9600 |
| C2—H2 | 0.9300 | C14—H14A | 0.9600 |
| C3—C4 | 1.363 (16) | C14—H14B | 0.9600 |
| C3—H3 | 0.9300 | C14—H14C | 0.9600 |
| C4—C5 | 1.384 (15) | ||
| N1—Hg1—N2 | 69.6 (3) | N2—C6—H6 | 119.1 |
| N1—Hg1—I1 | 114.5 (2) | C5—C6—H6 | 119.1 |
| N2—Hg1—I1 | 98.0 (2) | C12—C7—C8 | 120.1 (10) |
| N1—Hg1—I2 | 102.0 (2) | C12—C7—N2 | 116.4 (10) |
| N2—Hg1—I2 | 101.1 (2) | C8—C7—N2 | 123.4 (10) |
| I1—Hg1—I2 | 142.80 (4) | C7—C8—C9 | 118.4 (11) |
| C10—Hg2—Cl1 | 177.0 (4) | C7—C8—H8 | 120.8 |
| O1—S1—C14 | 103.7 (8) | C9—C8—H8 | 120.8 |
| O1—S1—C13 | 107.2 (8) | C10—C9—C8 | 121.9 (11) |
| C14—S1—C13 | 96.1 (9) | C10—C9—H9 | 119.1 |
| C1—N1—C5 | 118.4 (9) | C8—C9—H9 | 119.1 |
| C1—N1—Hg1 | 125.4 (7) | C11—C10—C9 | 119.0 (10) |
| C5—N1—Hg1 | 116.1 (6) | C11—C10—Hg2 | 121.3 (9) |
| C6—N2—C7 | 124.2 (9) | C9—C10—Hg2 | 119.7 (8) |
| C6—N2—Hg1 | 112.9 (7) | C10—C11—C12 | 119.4 (11) |
| C7—N2—Hg1 | 122.8 (7) | C10—C11—H11 | 120.3 |
| N1—C1—C2 | 123.7 (11) | C12—C11—H11 | 120.3 |
| N1—C1—H1 | 118.1 | C7—C12—C11 | 121.2 (11) |
| C2—C1—H1 | 118.1 | C7—C12—H12 | 119.4 |
| C3—C2—C1 | 117.0 (11) | C11—C12—H12 | 119.4 |
| C3—C2—H2 | 121.5 | S1—C13—H13A | 109.5 |
| C1—C2—H2 | 121.5 | S1—C13—H13B | 109.5 |
| C4—C3—C2 | 120.2 (11) | H13A—C13—H13B | 109.5 |
| C4—C3—H3 | 119.9 | S1—C13—H13C | 109.5 |
| C2—C3—H3 | 119.9 | H13A—C13—H13C | 109.5 |
| C3—C4—C5 | 119.6 (11) | H13B—C13—H13C | 109.5 |
| C3—C4—H4 | 120.2 | S1—C14—H14A | 109.5 |
| C5—C4—H4 | 120.2 | S1—C14—H14B | 109.5 |
| N1—C5—C4 | 121.1 (10) | H14A—C14—H14B | 109.5 |
| N1—C5—C6 | 118.9 (9) | S1—C14—H14C | 109.5 |
| C4—C5—C6 | 119.9 (10) | H14A—C14—H14C | 109.5 |
| N2—C6—C5 | 121.9 (10) | H14B—C14—H14C | 109.5 |
| N2—Hg1—N1—C1 | 177.0 (10) | C1—N1—C5—C6 | −177.2 (11) |
| I1—Hg1—N1—C1 | −93.4 (10) | Hg1—N1—C5—C6 | 5.9 (13) |
| I2—Hg1—N1—C1 | 79.5 (10) | C3—C4—C5—N1 | 0.5 (19) |
| N2—Hg1—N1—C5 | −6.4 (7) | C3—C4—C5—C6 | 177.1 (12) |
| I1—Hg1—N1—C5 | 83.2 (8) | C7—N2—C6—C5 | 176.5 (10) |
| I2—Hg1—N1—C5 | −103.9 (8) | Hg1—N2—C6—C5 | −6.5 (15) |
| N1—Hg1—N2—C6 | 6.6 (8) | N1—C5—C6—N2 | 0.7 (18) |
| I1—Hg1—N2—C6 | −106.7 (8) | C4—C5—C6—N2 | −176.0 (12) |
| I2—Hg1—N2—C6 | 105.4 (8) | C6—N2—C7—C12 | 177.5 (12) |
| N1—Hg1—N2—C7 | −176.3 (9) | Hg1—N2—C7—C12 | 0.8 (15) |
| I1—Hg1—N2—C7 | 70.4 (8) | C6—N2—C7—C8 | −1.3 (18) |
| I2—Hg1—N2—C7 | −77.5 (8) | Hg1—N2—C7—C8 | −178.0 (9) |
| C5—N1—C1—C2 | 1.4 (18) | C12—C7—C8—C9 | 1.7 (19) |
| Hg1—N1—C1—C2 | 177.9 (9) | N2—C7—C8—C9 | −179.6 (11) |
| N1—C1—C2—C3 | −2.0 (19) | C8—C9—C10—Hg2 | 180.0 (10) |
| C1—C2—C3—C4 | 1.8 (19) | Hg2—C10—C11—C12 | −179.5 (10) |
| C1—N1—C5—C4 | −0.6 (17) | N2—C7—C12—C11 | −180.0 (12) |
| Hg1—N1—C5—C4 | −177.4 (9) |
| H··· | ||||
| C8—H8···O1i | 0.93 | 2.54 | 3.458 (18) | 171 |
| C9—H9···Cl1ii | 0.93 | 2.83 | 3.625 (13) | 145 |
| C13—H13 | 0.96 | 2.83 | 3.721 (19) | 155 |
Selected bond lengths (Å)
| Hg1—I1 | 2.6581 (11) |
| Hg1—I2 | 2.6684 (12) |
| Hg1—N1 | 2.395 (9) |
| Hg1—N2 | 2.493 (9) |
| Hg2—Cl1 | 2.330 (3) |
| Hg2—C10 | 2.052 (10) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C8—H8⋯O1i | 0.93 | 2.54 | 3.458 (18) | 171 |
| C9—H9⋯Cl1ii | 0.93 | 2.83 | 3.625 (13) | 145 |
| C13—H13 | 0.96 | 2.83 | 3.721 (19) | 155 |
Symmetry codes: (i) ; (ii) ; (iii) .