| Literature DB >> 24454123 |
Chong-Hyeak Kim1, Yea-Sel Jeon2, Vincent Lynch3, Jonathan L Sessler3, Kwang-Jin Hwang2.
Abstract
In the title compound, C9H10N2, the two pyrrole ring planes are twisted by a dihedral angle of 69.07 (16)° and the C-C-C methane angle is 115.1 (2)°. In the crystal, mol-ecules are connected into layers in the bc plane by N-H⋯π inter-actions.Entities:
Year: 2013 PMID: 24454123 PMCID: PMC3884347 DOI: 10.1107/S1600536813028365
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H10N2 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 4189 reflections |
| θ = 3.0–27.5° | |
| µ = 0.08 mm−1 | |
| β = 100.78 (1)° | Needle, colourless |
| 0.32 × 0.08 × 0.06 mm | |
| Rigaku SCX-Mini with Mercury 2 CCD diffractometer | 1786 independent reflections |
| Radiation source: fine-focus sealed tube | 1374 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 27.5°, θmin = 3.4° |
| Absorption correction: multi-scan ( | |
| 4179 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 1786 reflections | Δρmax = 0.19 e Å−3 |
| 100 parameters | Δρmin = −0.23 e Å−3 |
| 61 restraints | Absolute structure: nd |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.2619 (4) | −0.0035 (4) | 0.5615 (3) | 0.0353 (6) | |
| H1 | 0.3300 | −0.0409 | 0.6603 | 0.042* | |
| C2 | 0.3488 (4) | 0.1182 (4) | 0.4732 (3) | 0.0331 (6) | |
| H2 | 0.4887 | 0.1802 | 0.4991 | 0.040* | |
| C3 | 0.1930 (4) | 0.1352 (3) | 0.3367 (3) | 0.0298 (6) | |
| H3 | 0.2088 | 0.2109 | 0.2538 | 0.036* | |
| C4 | 0.0136 (4) | 0.0222 (4) | 0.3451 (2) | 0.0284 (5) | |
| C5 | −0.2014 (4) | −0.0146 (4) | 0.2387 (2) | 0.0348 (6) | |
| H5A | −0.3267 | 0.0374 | 0.2818 | 0.042* | |
| H5B | −0.2242 | −0.1486 | 0.2310 | 0.042* | |
| C6 | −0.2144 (4) | 0.0606 (3) | 0.0837 (3) | 0.0301 (6) | |
| C7 | −0.3568 (4) | 0.1863 (4) | 0.0037 (3) | 0.0342 (6) | |
| H7 | −0.4721 | 0.2516 | 0.0396 | 0.041* | |
| C8 | −0.3029 (4) | 0.2019 (4) | −0.1402 (3) | 0.0362 (6) | |
| H8 | −0.3761 | 0.2785 | −0.2195 | 0.043* | |
| C9 | −0.1268 (4) | 0.0876 (4) | −0.1462 (2) | 0.0367 (6) | |
| H9 | −0.0530 | 0.0711 | −0.2294 | 0.044* | |
| N1 | 0.0597 (4) | −0.0620 (3) | 0.4825 (2) | 0.0344 (6) | |
| H1N | −0.0283 | −0.1423 | 0.5153 | 0.041* | |
| N2 | −0.0764 (3) | 0.0011 (3) | −0.0094 (2) | 0.0336 (5) | |
| H2N | 0.0302 | −0.0813 | 0.0148 | 0.040* |
| C1 | 0.0380 (14) | 0.0427 (15) | 0.0244 (12) | 0.0079 (13) | 0.0037 (11) | −0.0002 (12) |
| C2 | 0.0322 (13) | 0.0322 (14) | 0.0356 (13) | −0.0001 (11) | 0.0082 (11) | −0.0078 (11) |
| C3 | 0.0366 (13) | 0.0265 (13) | 0.0292 (12) | −0.0002 (10) | 0.0135 (11) | 0.0000 (10) |
| C4 | 0.0349 (12) | 0.0269 (13) | 0.0249 (11) | 0.0027 (10) | 0.0096 (10) | 0.0001 (9) |
| C5 | 0.0311 (12) | 0.0358 (14) | 0.0388 (14) | −0.0030 (11) | 0.0103 (11) | 0.0009 (11) |
| C6 | 0.0281 (12) | 0.0290 (14) | 0.0322 (13) | −0.0035 (10) | 0.0030 (10) | −0.0048 (10) |
| C7 | 0.0248 (13) | 0.0328 (14) | 0.0438 (15) | 0.0010 (11) | 0.0031 (11) | 0.0001 (11) |
| C8 | 0.0343 (14) | 0.0296 (14) | 0.0394 (14) | −0.0002 (11) | −0.0070 (12) | 0.0034 (11) |
| C9 | 0.0459 (14) | 0.0375 (16) | 0.0248 (13) | −0.0032 (13) | 0.0016 (11) | −0.0026 (11) |
| N1 | 0.0388 (12) | 0.0334 (13) | 0.0323 (11) | −0.0030 (10) | 0.0100 (10) | 0.0038 (9) |
| N2 | 0.0371 (11) | 0.0287 (11) | 0.0345 (11) | 0.0064 (10) | 0.0058 (9) | 0.0006 (9) |
| C1—C2 | 1.363 (4) | C5—H5B | 0.9900 |
| C1—N1 | 1.364 (3) | C6—N2 | 1.361 (3) |
| C1—H1 | 0.9500 | C6—C7 | 1.370 (3) |
| C2—C3 | 1.410 (3) | C7—C8 | 1.402 (3) |
| C2—H2 | 0.9500 | C7—H7 | 0.9500 |
| C3—C4 | 1.377 (3) | C8—C9 | 1.363 (3) |
| C3—H3 | 0.9500 | C8—H8 | 0.9500 |
| C4—N1 | 1.365 (3) | C9—N2 | 1.369 (3) |
| C4—C5 | 1.490 (3) | C9—H9 | 0.9500 |
| C5—C6 | 1.491 (3) | N1—H1N | 0.8800 |
| C5—H5A | 0.9900 | N2—H2N | 0.8800 |
| C2—C1—N1 | 107.8 (2) | N2—C6—C7 | 106.7 (2) |
| C2—C1—H1 | 126.1 | N2—C6—C5 | 122.0 (2) |
| N1—C1—H1 | 126.1 | C7—C6—C5 | 131.2 (2) |
| C1—C2—C3 | 107.5 (2) | C6—C7—C8 | 108.1 (2) |
| C1—C2—H2 | 126.3 | C6—C7—H7 | 125.9 |
| C3—C2—H2 | 126.3 | C8—C7—H7 | 125.9 |
| C4—C3—C2 | 107.7 (2) | C9—C8—C7 | 107.8 (2) |
| C4—C3—H3 | 126.2 | C9—C8—H8 | 126.1 |
| C2—C3—H3 | 126.2 | C7—C8—H8 | 126.1 |
| N1—C4—C3 | 107.0 (2) | C8—C9—N2 | 107.0 (2) |
| N1—C4—C5 | 120.6 (2) | C8—C9—H9 | 126.5 |
| C3—C4—C5 | 132.4 (2) | N2—C9—H9 | 126.5 |
| C4—C5—C6 | 115.1 (2) | C1—N1—C4 | 110.1 (2) |
| C4—C5—H5A | 108.5 | C1—N1—H1N | 124.9 |
| C6—C5—H5A | 108.5 | C4—N1—H1N | 124.9 |
| C4—C5—H5B | 108.5 | C6—N2—C9 | 110.5 (2) |
| C6—C5—H5B | 108.5 | C6—N2—H2N | 124.8 |
| H5A—C5—H5B | 107.5 | C9—N2—H2N | 124.8 |
| N1—C1—C2—C3 | 0.5 (3) | C5—C6—C7—C8 | −177.2 (2) |
| C1—C2—C3—C4 | −0.1 (3) | C6—C7—C8—C9 | −0.7 (3) |
| C2—C3—C4—N1 | −0.4 (3) | C7—C8—C9—N2 | 1.1 (3) |
| C2—C3—C4—C5 | 178.4 (3) | C2—C1—N1—C4 | −0.8 (3) |
| N1—C4—C5—C6 | −170.1 (2) | C3—C4—N1—C1 | 0.7 (3) |
| C3—C4—C5—C6 | 11.2 (4) | C5—C4—N1—C1 | −178.3 (2) |
| C4—C5—C6—N2 | 64.4 (3) | C7—C6—N2—C9 | 0.6 (3) |
| C4—C5—C6—C7 | −118.6 (3) | C5—C6—N2—C9 | 178.2 (2) |
| N2—C6—C7—C8 | 0.1 (3) | C8—C9—N2—C6 | −1.0 (3) |
| H··· | ||||
| N1—H1 | 0.88 | 2.53 | 3.357 (3) | 156 |
| N2—H2 | 0.88 | 2.53 | 3.363 (3) | 159 |
Hydrogen-bond geometry (Å, °)
Cg1 and Cg2 are the centroids of the N1/C1–C4 and N2/C6–C9 rings, respectively.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.88 | 2.53 | 3.357 (3) | 156 |
| N2—H2 | 0.88 | 2.53 | 3.363 (3) | 159 |
Symmetry codes: (i) ; (ii) .