Literature DB >> 24452907

How "drug-like" are naturally occurring anti-cancer compounds?

Fidele Ntie-Kang1, Lydia L Lifongo, Philip N Judson, Wolfgang Sippl, Simon M N Efange.   

Abstract

We attempt to evaluate the "drug-likeness" of a collection of ∼1500 natural products, exhibiting in vitro or in vivo activities against cancers of various forms, by using a set of calculated molecular descriptors. Compliance to Lipinski's "Rule of Five" and Jorgensen's "Rule of Three" have been used to assess oral availability, by making use of popular parameters like molecular weights, predicted lipophilicities, number of hydrogen bond donors/acceptors, predicted aqueous solubilities, number of primary metabolites and Caco-2 permeabilities. Meanwhile 24 descriptors have been used to predict properties related to the absorption, distribution, metabolism, elimination, and toxicity (ADMET). The ADMET profiles of the anticancer natural products have been analyzed in comparision with the range of properties for 95 % of known drugs. Our results show that the computed parameters fall within the recommended range for about 42 % of the studied compounds, while respectively 63 % and 69 % of the corresponding 'drug-like' and 'lead-like' subsets had properties predicted to fall within the recommended range for 95 % of known drugs. The aim of giving a picture of how drug-like they are and bring out the need to return to natural sources in searching for anticancer lead compounds.

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Year:  2014        PMID: 24452907     DOI: 10.1007/s00894-014-2069-z

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  52 in total

1.  Knowledge-based expert systems for toxicity and metabolism prediction: DEREK, StAR and METEOR.

Authors:  N Greene; P N Judson; J J Langowski; C A Marchant
Journal:  SAR QSAR Environ Res       Date:  1999       Impact factor: 3.000

Review 2.  HERG K+ channels: friend and foe.

Authors:  J I Vandenberg; B D Walker; T J Campbell
Journal:  Trends Pharmacol Sci       Date:  2001-05       Impact factor: 14.819

3.  QSAR and ADME.

Authors:  Corwin Hansch; Albert Leo; Suresh Babu Mekapati; Alka Kurup
Journal:  Bioorg Med Chem       Date:  2004-06-15       Impact factor: 3.641

4.  Prediction of Absolute Solvation Free Energies using Molecular Dynamics Free Energy Perturbation and the OPLS Force Field.

Authors:  Devleena Shivakumar; Joshua Williams; Yujie Wu; Wolfgang Damm; John Shelley; Woody Sherman
Journal:  J Chem Theory Comput       Date:  2010-04-14       Impact factor: 6.006

Review 5.  The evolving role of natural products in drug discovery.

Authors:  Frank E Koehn; Guy T Carter
Journal:  Nat Rev Drug Discov       Date:  2005-03       Impact factor: 84.694

Review 6.  New aspects of natural products in drug discovery.

Authors:  Kin S Lam
Journal:  Trends Microbiol       Date:  2007-04-11       Impact factor: 17.079

7.  Plants used against cancer. A survey.

Authors:  J L Hartwell
Journal:  Lloydia       Date:  1970-03

8.  A predictive algorithm for skin permeability: the effects of molecular size and hydrogen bond activity.

Authors:  R O Potts; R H Guy
Journal:  Pharm Res       Date:  1995-11       Impact factor: 4.200

9.  In silico drug metabolism and pharmacokinetic profiles of natural products from medicinal plants in the Congo basin.

Authors:  Fidele Ntie-Kang; Lydia L Lifongo; James A Mbah; Luc C Owono Owono; Eugene Megnassan; Luc Meva'a Mbaze; Philip N Judson; Wolfgang Sippl; Simon M N Efange
Journal:  In Silico Pharmacol       Date:  2013-08-08

10.  CamMedNP: building the Cameroonian 3D structural natural products database for virtual screening.

Authors:  Fidele Ntie-Kang; James A Mbah; Luc Meva'a Mbaze; Lydia L Lifongo; Michael Scharfe; Joelle Ngo Hanna; Fidelis Cho-Ngwa; Pascal Amoa Onguéné; Luc C Owono Owono; Eugene Megnassan; Wolfgang Sippl; Simon M N Efange
Journal:  BMC Complement Altern Med       Date:  2013-04-16       Impact factor: 3.659

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  3 in total

Review 1.  Counting on natural products for drug design.

Authors:  Tiago Rodrigues; Daniel Reker; Petra Schneider; Gisbert Schneider
Journal:  Nat Chem       Date:  2016-04-25       Impact factor: 24.427

Review 2.  Natural Products for Drug Discovery in the 21st Century: Innovations for Novel Drug Discovery.

Authors:  Nicholas Ekow Thomford; Dimakatso Alice Senthebane; Arielle Rowe; Daniella Munro; Palesa Seele; Alfred Maroyi; Kevin Dzobo
Journal:  Int J Mol Sci       Date:  2018-05-25       Impact factor: 5.923

3.  Pharmacophore modeling and in silico toxicity assessment of potential anticancer agents from African medicinal plants.

Authors:  Fidele Ntie-Kang; Conrad Veranso Simoben; Berin Karaman; Valery Fuh Ngwa; Philip Neville Judson; Wolfgang Sippl; Luc Meva'a Mbaze
Journal:  Drug Des Devel Ther       Date:  2016-07-04       Impact factor: 4.162

  3 in total

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