Literature DB >> 24449275

Thread insertion of a bis(dipyridophenazine) diruthenium complex into the DNA double helix by the extrusion of AT base pairs and cross-linking of DNA duplexes.

D Roeland Boer1, Lisha Wu, Per Lincoln, Miquel Coll.   

Abstract

The crystal structure of the Δ,Δ enantiomer of the binuclear "light-switch" ruthenium complex [μ-(11,11'-bidppz)(1,10-phenanthroline)4  Ru2 ](4+) bound to the oligonucleotide d(CGTACG) shows that one dppz moiety of the dumbbell-like compound inserts into the DNA stack through the extrusion of an AT base pair. The second dppz moiety recruits a neighboring DNA molecule, and the complex thus cross-links two adjacent duplexes by bridging their major grooves.
Copyright © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA metalloinsertors; DNA threading; X-ray crystal structures; base-pair extrusion; ruthenium binuclear complexes

Mesh:

Substances:

Year:  2014        PMID: 24449275     DOI: 10.1002/anie.201308070

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  8 in total

1.  Mechanisms of small molecule-DNA interactions probed by single-molecule force spectroscopy.

Authors:  Ali A Almaqwashi; Thayaparan Paramanathan; Ioulia Rouzina; Mark C Williams
Journal:  Nucleic Acids Res       Date:  2016-04-16       Impact factor: 16.971

2.  Dissecting the Dynamic Pathways of Stereoselective DNA Threading Intercalation.

Authors:  Ali A Almaqwashi; Johanna Andersson; Per Lincoln; Ioulia Rouzina; Fredrik Westerlund; Mark C Williams
Journal:  Biophys J       Date:  2016-03-29       Impact factor: 4.033

3.  Strong DNA deformation required for extremely slow DNA threading intercalation by a binuclear ruthenium complex.

Authors:  Ali A Almaqwashi; Thayaparan Paramanathan; Per Lincoln; Ioulia Rouzina; Fredrik Westerlund; Mark C Williams
Journal:  Nucleic Acids Res       Date:  2014-09-22       Impact factor: 16.971

4.  Metal-mediated diradical tuning for DNA replication arrest via template strand scission.

Authors:  Meghan R Porter; Sarah E Lindahl; Anne Lietzke; Erin M Metzger; Quan Wang; Erik Henck; Chun-Hsing Chen; Hengyao Niu; Jeffrey M Zaleski
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-31       Impact factor: 11.205

5.  DNA intercalation optimized by two-step molecular lock mechanism.

Authors:  Ali A Almaqwashi; Johanna Andersson; Per Lincoln; Ioulia Rouzina; Fredrik Westerlund; Mark C Williams
Journal:  Sci Rep       Date:  2016-12-05       Impact factor: 4.379

6.  Delta chirality ruthenium 'light-switch' complexes can bind in the minor groove of DNA with five different binding modes.

Authors:  James P Hall; Páraic M Keane; Hanna Beer; Katrin Buchner; Graeme Winter; Thomas L Sorensen; David J Cardin; John A Brazier; Christine J Cardin
Journal:  Nucleic Acids Res       Date:  2016-09-05       Impact factor: 16.971

7.  Photochemically active DNA-intercalating ruthenium and related complexes - insights by combining crystallography and transient spectroscopy.

Authors:  Christine J Cardin; John M Kelly; Susan J Quinn
Journal:  Chem Sci       Date:  2017-04-12       Impact factor: 9.825

8.  Electrochemical investigations of DNA-Intercalation potency of bisnitrophenoxy compounds with different alkyl chain lengths.

Authors:  Maria Shakeel; Tehmeena Maryum Butt; Maria Zubair; Humaira Masood Siddiqi; Naveed Kauser Janjua; Zareen Akhter; Azra Yaqub; Sadia Mahmood
Journal:  Heliyon       Date:  2020-06-08
  8 in total

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