Literature DB >> 24447882

Molecular evidence for the monophyly of flatfishes (Carangimorpharia: Pleuronectiformes).

Ricardo Betancur-R1, Guillermo Ortí2.   

Abstract

Proliferation of phylogenetic studies based on poor taxonomic sampling or insufficient molecular evidence usually leads to conflicting results. As a consequence, advancement of systematic knowledge yields to confusion. The problem is exacerbated for taxonomic groups with historically difficult resolution of evolutionary relationships such as the flatfishes. Molecular evidence to support monophyly for this emblematic group of fishes and their interrelationships has been elusive, and a recent paper published in this journal went as far as to claim that flatfish monophyly can be rejected with molecular data, implying that the asymmetric body plan unique to these fishes had two independent origins. A reanalysis of this evidence suggests the contrary and combination of the new data with existing datasets unequivocally supports the monophyly of this group based on analyses of concatenated data as well as species tree approaches. Resolution of difficult phylogenetic problems requires analysis of larger datasets with adequate taxonomic coverage and sound hypothesis-testing procedures. Proliferation of partial studies claiming extraordinary results should be avoided in order to advance the field of molecular phylogenetics.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Gene tree discordance; Genetic sampling; Hard phylogenetic question; Hypothesis testing; Systematic error; Taxonomic sampling

Mesh:

Year:  2014        PMID: 24447882     DOI: 10.1016/j.ympev.2014.01.006

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  10 in total

1.  Phylogenomic analysis of carangimorph fishes reveals flatfish asymmetry arose in a blink of the evolutionary eye.

Authors:  Richard C Harrington; Brant C Faircloth; Ron I Eytan; W Leo Smith; Thomas J Near; Michael E Alfaro; Matt Friedman
Journal:  BMC Evol Biol       Date:  2016-10-21       Impact factor: 3.260

2.  Phylogenetic classification of bony fishes.

Authors:  Ricardo Betancur-R; Edward O Wiley; Gloria Arratia; Arturo Acero; Nicolas Bailly; Masaki Miya; Guillaume Lecointre; Guillermo Ortí
Journal:  BMC Evol Biol       Date:  2017-07-06       Impact factor: 3.260

3.  Flatfish monophyly refereed by the relationship of Psettodes in Carangimorphariae.

Authors:  Wei Shi; Shixi Chen; Xiaoyu Kong; Lizhen Si; Li Gong; Yanchun Zhang; Hui Yu
Journal:  BMC Genomics       Date:  2018-05-25       Impact factor: 3.969

4.  Evidence for a Robertsonian fusion in Solea senegalensis (Kaup, 1858) revealed by zoo-FISH and comparative genome analysis.

Authors:  Aglaya García-Angulo; Manuel A Merlo; Silvia Portela-Bens; María E Rodríguez; Emilio García; Ahmed Al-Rikabi; Thomas Liehr; Laureana Rebordinos
Journal:  BMC Genomics       Date:  2018-11-14       Impact factor: 3.969

5.  Flatfishes colonised freshwater environments by acquisition of various DHA biosynthetic pathways.

Authors:  Yoshiyuki Matsushita; Kaho Miyoshi; Naoki Kabeya; Shuwa Sanada; Ryosuke Yazawa; Yutaka Haga; Shuichi Satoh; Yoji Yamamoto; Carlos Augusto Strüssmann; John Adam Luckenbach; Goro Yoshizaki
Journal:  Commun Biol       Date:  2020-09-18

6.  Phylogenetics of Archerfishes (Toxotidae) and Evolution of the Toxotid Shooting Apparatus.

Authors:  M G Girard; M P Davis; Tan H H; D J Wedd; P Chakrabarty; W B Ludt; A P Summers; W L Smith
Journal:  Integr Org Biol       Date:  2022-03-21

Review 7.  Some Examples of the Use of Molecular Markers for Needs of Basic Biology and Modern Society.

Authors:  Yuri Phedorovich Kartavtsev
Journal:  Animals (Basel)       Date:  2021-05-20       Impact factor: 2.752

8.  Concerted Evolution of Duplicate Control Regions in the Mitochondria of Species of the Flatfish Family Bothidae (Teleostei: Pleuronectiformes).

Authors:  Dong-He Li; Wei Shi; Thomas A Munroe; Li Gong; Xiao-Yu Kong
Journal:  PLoS One       Date:  2015-08-03       Impact factor: 3.240

9.  Green-shifting of SWS2A opsin sensitivity and loss of function of RH2-A opsin in flounders, genus Verasper.

Authors:  Satoshi Kasagi; Kanta Mizusawa; Akiyoshi Takahashi
Journal:  Ecol Evol       Date:  2017-12-27       Impact factor: 2.912

10.  SIESTA: enhancing searches for optimal supertrees and species trees.

Authors:  Pranjal Vachaspati; Tandy Warnow
Journal:  BMC Genomics       Date:  2018-05-08       Impact factor: 3.969

  10 in total

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