Literature DB >> 24445280

Model for high-throughput screening of drug immunotoxicity--study of the anti-microbial G1 over peritoneal macrophages using flow cytometry.

Esvieta Tenorio-Borroto1, Claudia G Peñuelas-Rivas2, Juan C Vásquez-Chagoyán2, Nilo Castañedo3, Francisco J Prado-Prado4, Xerardo García-Mera5, Humberto González-Díaz6.   

Abstract

Quantitative Structure-Activity (mt-QSAR) techniques may become an important tool for prediction of cytotoxicity and High-throughput Screening (HTS) of drugs to rationalize drug discovery process. In this work, we train and validate by the first time mt-QSAR model using TOPS-MODE approach to calculate drug molecular descriptors and Linear Discriminant Analysis (LDA) function. This model correctly classifies 8258 out of 9000 (Accuracy = 91.76%) multiplexing assay endpoints of 7903 drugs (including both train and validation series). Each endpoint correspond to one out of 1418 assays, 36 molecular and cellular targets, 46 standard type measures, in two possible organisms (human and mouse). After that, we determined experimentally, by the first time, the values of EC50 = 21.58 μg/mL and Cytotoxicity = 23.6% for the anti-microbial/anti-parasite drug G1 over Balb/C mouse peritoneal macrophages using flow cytometry. In addition, the model predicts for G1 only 7 positive endpoints out 1251 cytotoxicity assays (0.56% of probability of cytotoxicity in multiple assays). The results obtained complement the toxicological studies of this important drug. This work adds a new tool to the existing pool of few methods useful for multi-target HTS of ChEMBL and other libraries of compounds towards drug discovery.
Copyright © 2013 Elsevier Masson SAS. All rights reserved.

Entities:  

Keywords:  ChEMBL; Chemical database of European Molecular Biology Laboratory; Drug immunotoxicity; Flow cytometry; High-throughput model; LDA; Macrophage; Multiplex assay endpoints; QSAR model; QSAR/QSTR; linear discriminant analysis; quantitative-structure/toxicity relationship

Mesh:

Substances:

Year:  2013        PMID: 24445280     DOI: 10.1016/j.ejmech.2013.08.035

Source DB:  PubMed          Journal:  Eur J Med Chem        ISSN: 0223-5234            Impact factor:   6.514


  3 in total

1.  Fragment-based in silico modeling of multi-target inhibitors against breast cancer-related proteins.

Authors:  Alejandro Speck-Planche; M Natália D S Cordeiro
Journal:  Mol Divers       Date:  2017-02-13       Impact factor: 2.943

Review 2.  In Silico Models for Predicting Acute Systemic Toxicity.

Authors:  Ivanka Tsakovska; Antonia Diukendjieva; Andrew P Worth
Journal:  Methods Mol Biol       Date:  2022

3.  PTML Modeling for Pancreatic Cancer Research: In Silico Design of Simultaneous Multi-Protein and Multi-Cell Inhibitors.

Authors:  Valeria V Kleandrova; Alejandro Speck-Planche
Journal:  Biomedicines       Date:  2022-02-18
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.