Literature DB >> 24442717

Arabidopsis thaliana NAC083 protein interacts with Mungbean yellow mosaic India virus (MYMIV) Rep protein.

Geetika Suyal1, Vipin Singh Rana, Sunil Kumar Mukherjee, Saima Wajid, Nirupam Roy Choudhury.   

Abstract

Geminiviral replication initiator protein (Rep) is a key player in geminiviral rolling circle mode of replication. However, the virus exploits various host cellular machineries for its replication. Study of these host factors is important to understand the geminiviral DNA replication in greater details. With this view, we screened for the peptides interacting with the Rep protein of a representative of geminivirus, namely, Mungbean yellow mosaic India virus (MYMIV), employing phage display technique. Through this screen, we have identified a host transcription factor, NAC083, as a potential MYMIV-Rep-binding partner. In silico docking studies also suggested possible binding of NAC083 peptide to MYMIV-Rep. We validated the interaction between MYMIV-Rep and Arabidopsis thaliana full-length NAC083 protein using in vitro pull-down assay and yeast two-hybrid analysis. NAC proteins are well-known transcription factors belonging to the largest gene families in plants. This study demonstrates for the first time the interaction of NAC083, a member of NAC transcription factor family, with MYMIV-Rep protein thereby indicating its possible role in MYMIV DNA replication.

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Year:  2014        PMID: 24442717     DOI: 10.1007/s11262-013-1028-6

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  38 in total

1.  GRAB proteins, novel members of the NAC domain family, isolated by their interaction with a geminivirus protein.

Authors:  Q Xie; A P Sanz-Burgos; H Guo; J A García; C Gutiérrez
Journal:  Plant Mol Biol       Date:  1999-03       Impact factor: 4.076

2.  The DNA-A component of a plant geminivirus (Indian mung bean yellow mosaic virus) replicates in budding yeast cells.

Authors:  Vineetha Raghavan; Punjab S Malik; Nirupam Roy Choudhury; Sunil K Mukherjee
Journal:  J Virol       Date:  2004-03       Impact factor: 5.103

3.  Genome-wide screens for identification of host factors in viral replication.

Authors:  Tadas Panavas; Elena Serviene; Judit Pogany; Peter D Nagy
Journal:  Methods Mol Biol       Date:  2008

4.  A NAC domain protein interacts with tomato leaf curl virus replication accessory protein and enhances viral replication.

Authors:  Luke A Selth; Satish C Dogra; M Saif Rasheed; Helen Healy; John W Randles; M Ali Rezaian
Journal:  Plant Cell       Date:  2004-12-17       Impact factor: 11.277

5.  A novel motif in geminivirus replication proteins interacts with the plant retinoblastoma-related protein.

Authors:  Gerardo Arguello-Astorga; Luisa Lopez-Ochoa; Ling-Jie Kong; Beverly M Orozco; Sharon B Settlage; Linda Hanley-Bowdoin
Journal:  J Virol       Date:  2004-05       Impact factor: 5.103

6.  MYMIV replication initiator protein (Rep): roles at the initiation and elongation steps of MYMIV DNA replication.

Authors:  Dharmendra Kumar Singh; Punjab Singh Malik; Nirupam Roy Choudhury; Sunil Kumar Mukherjee
Journal:  Virology       Date:  2008-08-15       Impact factor: 3.616

7.  Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.

Authors:  José Trinidad Ascencio-Ibáñez; Rosangela Sozzani; Tae-Jin Lee; Tzu-Ming Chu; Russell D Wolfinger; Rino Cella; Linda Hanley-Bowdoin
Journal:  Plant Physiol       Date:  2008-07-23       Impact factor: 8.340

8.  Interactions between geminivirus replication proteins.

Authors:  S B Settlage; A B Miller; L Hanley-Bowdoin
Journal:  J Virol       Date:  1996-10       Impact factor: 5.103

9.  Identification and analysis of a retinoblastoma binding motif in the replication protein of a plant DNA virus: requirement for efficient viral DNA replication.

Authors:  Q Xie; P Suárez-López; C Gutiérrez
Journal:  EMBO J       Date:  1995-08-15       Impact factor: 11.598

10.  The 32 kDa subunit of replication protein A (RPA) participates in the DNA replication of Mung bean yellow mosaic India virus (MYMIV) by interacting with the viral Rep protein.

Authors:  Dharmendra Kumar Singh; Mohammad Nurul Islam; Nirupam Roy Choudhury; Sumona Karjee; Sunil Kumar Mukherjee
Journal:  Nucleic Acids Res       Date:  2006-12-20       Impact factor: 16.971

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  7 in total

1.  Multifunctional roles of geminivirus encoded replication initiator protein.

Authors:  Rajrani Ruhel; Supriya Chakraborty
Journal:  Virusdisease       Date:  2018-06-09

Review 2.  Geminiviruses and Plant Hosts: A Closer Examination of the Molecular Arms Race.

Authors:  Shunmugiah V Ramesh; Pranav P Sahu; Manoj Prasad; Shelly Praveen; Hanu R Pappu
Journal:  Viruses       Date:  2017-09-15       Impact factor: 5.048

3.  Comparative transcriptome profiling uncovers a Lilium regale NAC transcription factor, LrNAC35, contributing to defence response against cucumber mosaic virus and tobacco mosaic virus.

Authors:  Daoyang Sun; Xinguo Zhang; Qingyu Zhang; Xiaotong Ji; Yong Jia; Hong Wang; Lixin Niu; Yanlong Zhang
Journal:  Mol Plant Pathol       Date:  2019-09-27       Impact factor: 5.663

4.  Comparative RNA-Seq analysis unfolds a complex regulatory network imparting yellow mosaic disease resistance in mungbean [Vigna radiata (L.) R. Wilczek].

Authors:  Uttarayan Dasgupta; Gyan Prakash Mishra; Harsh K Dikshit; Dwijesh C Mishra; Tejas Bosamia; Anirban Roy; Jyotika Bhati; Muraleedhar Aski; Ranjeet R Kumar; Amit Kumar Singh; Atul Kumar; Subodh K Sinha; Shiksha Chaurasia; Shelly Praveen; Ramakrishnan M Nair
Journal:  PLoS One       Date:  2021-01-12       Impact factor: 3.240

5.  Genome-wide identification and comprehensive analyses of NAC transcription factor gene family and expression analysis under Fusarium kyushuense and drought stress conditions in Passiflora edulis.

Authors:  Qiang Yang; Binqi Li; Hafiz Muhammad Rizwan; Kaiwei Sun; Jiajing Zeng; Meng Shi; Tianxin Guo; Faxing Chen
Journal:  Front Plant Sci       Date:  2022-08-25       Impact factor: 6.627

6.  Overexpression of the Eggplant (Solanum melongena) NAC Family Transcription Factor SmNAC Suppresses Resistance to Bacterial Wilt.

Authors:  Chen Na; Wu Shuanghua; Fu Jinglong; Cao Bihao; Lei Jianjun; Chen Changming; Jiang Jin
Journal:  Sci Rep       Date:  2016-08-16       Impact factor: 4.379

7.  Transcriptome Analysis of Watermelon Leaves Reveals Candidate Genes Responsive to Cucumber green mottle mosaic virus Infection.

Authors:  Yuyan Sun; Min Fan; Yanjun He
Journal:  Int J Mol Sci       Date:  2019-01-31       Impact factor: 5.923

  7 in total

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