Literature DB >> 24436333

Central cavity of fructose-1,6-bisphosphatase and the evolution of AMP/fructose 2,6-bisphosphate synergism in eukaryotic organisms.

Yang Gao1, Lu Shen, Richard B Honzatko.   

Abstract

The effects of AMP and fructose 2,6-bisphosphate (Fru-2,6-P2) on porcine fructose-1,6-bisphosphatase (pFBPase) and Escherichia coli FBPase (eFBPase) differ in three respects. AMP/Fru-2,6-P2 synergism in pFBPase is absent in eFBPase. Fru-2,6-P2 induces a 13° subunit pair rotation in pFBPase but no rotation in eFBPase. Hydrophilic side chains in eFBPase occupy what otherwise would be a central aqueous cavity observed in pFBPase. Explored here is the linkage of AMP/Fru-2,6-P2 synergism to the central cavity and the evolution of synergism in FBPases. The single mutation Ser(45) → His substantially fills the central cavity of pFBPase, and the triple mutation Ser(45) → His, Thr(46) → Arg, and Leu(186) → Tyr replaces porcine with E. coli type side chains. Both single and triple mutations significantly reduce synergism while retaining other wild-type kinetic properties. Similar to the effect of Fru-2,6-P2 on eFBPase, the triple mutant of pFBPase with bound Fru-2,6-P2 exhibits only a 2° subunit pair rotation as opposed to the 13° rotation exhibited by the Fru-2,6-P2 complex of wild-type pFBPase. The side chain at position 45 is small in all available eukaryotic FBPases but large and hydrophilic in bacterial FBPases, similar to eFBPase. Sequence information indicates the likelihood of synergism in the FBPase from Leptospira interrogans (lFBPase), and indeed recombinant lFBPase exhibits AMP/Fru-2,6-P2 synergism. Unexpectedly, however, AMP also enhances Fru-6-P binding to lFBPase. Taken together, these observations suggest the evolution of AMP/Fru-2,6-P2 synergism in eukaryotic FBPases from an ancestral FBPase having a central aqueous cavity and exhibiting synergistic feedback inhibition by AMP and Fru-6-P.

Entities:  

Keywords:  Allosteric Regulation; Crystal Structure; Enzyme Inhibitors; Enzyme Kinetics; Evolution; Gluconeogenesis; Metabolism

Mesh:

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Year:  2014        PMID: 24436333      PMCID: PMC3961670          DOI: 10.1074/jbc.M114.548586

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  52 in total

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Authors:  F Liu; H J Fromm
Journal:  Arch Biochem Biophys       Date:  1988-02-01       Impact factor: 4.013

2.  Tryptophan fluorescence reveals the conformational state of a dynamic loop in recombinant porcine fructose-1,6-bisphosphatase.

Authors:  S W Nelson; C V Iancu; J Y Choe; R B Honzatko; H J Fromm
Journal:  Biochemistry       Date:  2000-09-12       Impact factor: 3.162

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Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

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Authors:  G A Tejwani
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1983

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Authors:  H M Ke; Y P Zhang; W N Lipscomb
Journal:  Proc Natl Acad Sci U S A       Date:  1990-07       Impact factor: 11.205

6.  The interaction of fructose 2,6-bisphosphate and AMP with rat hepatic fructose 1,6-bisphosphatase.

Authors:  M M McGrane; M R El-Maghrabi; S J Pilkis
Journal:  J Biol Chem       Date:  1983-09-10       Impact factor: 5.157

7.  Directed mutations in the poorly defined region of porcine liver fructose-1,6-bisphosphatase significantly affect catalysis and the mechanism of AMP inhibition.

Authors:  F T Kurbanov; J Y Choe; R B Honzatko; H J Fromm
Journal:  J Biol Chem       Date:  1998-07-10       Impact factor: 5.157

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Authors:  Yang Gao; Cristina V Iancu; Susmith Mukind; Jun-Yong Choe; Richard B Honzatko
Journal:  Biochemistry       Date:  2013-07-24       Impact factor: 3.162

9.  Structures of mammalian and bacterial fructose-1,6-bisphosphatase reveal the basis for synergism in AMP/fructose 2,6-bisphosphate inhibition.

Authors:  Justin K Hines; Xiaoming Chen; Jay C Nix; Herbert J Fromm; Richard B Honzatko
Journal:  J Biol Chem       Date:  2007-10-12       Impact factor: 5.157

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Authors:  S J Pilkis; M R El-Maghrabi; J Pilkis; T Claus
Journal:  J Biol Chem       Date:  1981-04-25       Impact factor: 5.157

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  2 in total

1.  T-to-R switch of muscle fructose-1,6-bisphosphatase involves fundamental changes of secondary and quaternary structure.

Authors:  Jakub Barciszewski; Janusz Wisniewski; Robert Kolodziejczyk; Mariusz Jaskolski; Dariusz Rakus; Andrzej Dzugaj
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-03-30       Impact factor: 7.652

2.  Structures of Leishmania Fructose-1,6-Bisphosphatase Reveal Species-Specific Differences in the Mechanism of Allosteric Inhibition.

Authors:  Meng Yuan; Montserrat G Vásquez-Valdivieso; Iain W McNae; Paul A M Michels; Linda A Fothergill-Gilmore; Malcolm D Walkinshaw
Journal:  J Mol Biol       Date:  2017-09-04       Impact factor: 5.469

  2 in total

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