| Literature DB >> 24432156 |
Uddipan Sarma1, Prashant M Gade2, Bhaskar Saha1.
Abstract
Ligand bound-receptors in a signalosome complex trigger signals to determine cellular functions. Upon ligand binding, the ligand-receptor complexes form clusters on cell membrane. Guided by the previous experimental reports on the cluster formation of CD40, a trans membrane receptor for CD40-ligand, we built a minimal model of the receptor cluster formation. In this model, we studied co-operative and non-co-operative clustering of a maximum of four CD40 molecules assuming a positive mediator of clustering such as cholesterol to be present in both cases. We observed that co-operative interactions between CD40 molecules resulted in more of the largest CD40 clusters than that observed with the non-co-operatively interacting CD40 molecules. We performed global sensitivity analysis on the model parameters and the analyses suggested that cholesterol influenced only the initial stage of the co-operatively clustering CD40 molecules but it affects both the initial and the final stages in case of the non-co-operatively clustering CD40 molecules. Robustness analyses revealed that in both co-operative and non-co-operative interactions, the higher order clusters beyond a critical size are more robust with respect to alterations in the environmental parameters including the cholesterol. Thus, the role of co-operative and non-co-operative interactions in environment-influenced receptor clustering is reported for the first time.Entities:
Keywords: CD40; Cholesterol in receptor clustering; Clustering dynamics; Co-operativity in receptor clustering and robustness; Kinetic model for receptor clustering
Year: 2013 PMID: 24432156 PMCID: PMC3824818 DOI: 10.1007/s11693-013-9112-8
Source DB: PubMed Journal: Syst Synth Biol ISSN: 1872-5325