| Literature DB >> 24428907 |
Daniel Vergho1, Susanne Kneitz, Andreas Rosenwald, Charlotte Scherer, Martin Spahn, Maximilian Burger, Hubertus Riedmiller, Burkhard Kneitz.
Abstract
BACKGROUND: Renal cell carcinoma (RCC) is marked by high mortality rate. To date, no robust risk stratification by clinical or molecular prognosticators of cancer-specific survival (CSS) has been established for early stages. Transcriptional profiling of small non-coding RNA gene products (miRNAs) seems promising for prognostic stratification. The expression of miR-21 and miR-126 was analysed in a large cohort of RCC patients; a combined risk score (CRS)-model was constructed based on expression levels of both miRNAs.Entities:
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Year: 2014 PMID: 24428907 PMCID: PMC3897948 DOI: 10.1186/1471-2407-14-25
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Figure 1Expression of miR-126 and miR-21 in RCC. Box-Whisker-Plot : A) Relative expression of miR-21 and miR-126 in RCC and normal renal tissue (n = 103). MiR-21 expression is significantly higher in RCC (p < 0,001), but overall miR-126 expression is not changed (p = 0.57) in RCC compared to the expression of control tissue. Expression was analysed by qRT-PCR and normalized against RNU6b. P-values were calculated by unpaired students t-test. B) Proportion of RCC patients with dysregulation of miR-21 and miR-126: Expression of miRs in tumour and control tissue was verified by qRT-PCR in triplicates. MiR expression ratio of each tumour specimen compared to the expression in corresponding adjacent normal tissue was calculated by the ΔΔCt method. All patients were divided into three groups by > < 2 fold up- or down-regulation of miR-21 or miR-126 in RCC.
Clinical and pathological patient characteristics (n = 103)
| Age, years (range) | 65 (32–91) | |
| Follow up, months (st. dev) | 33 (± 15, 2) | |
| Pathological tumor stage | | |
| pT1a | 27, (26, 2%) | |
| pT1b | 28 (27, 2%) | |
| pT2 | 11 (10, 7%) | |
| pT3a | 7 (6, 8%) | |
| pT3b | 28 (27, 2%) | |
| pT3c | 2 (1, 9%) | |
| Grading | | |
| 1 | 12 (11, 7%) | |
| 2 | 69 (66, 9%) | |
| 3 | 22 (21, 4%) | |
| Metastasis at time of surgery | | |
| No | 88 (84, 5%) | |
| Yes | 16 (15, 5%) | |
| Surgery | | |
| nephron sparing | 26 (25, 2%) | |
| pT1a | 67% (18 of 27 patients) | |
| pT1b | 29% (8 of 28 patients) | |
| pT2-3c | 0% (0 of 48 patients) | |
| nephrectomy | 77 (74, 8%) | |
| Clinical failure | | |
| No | 82 (79, 6%) | |
| Yes | 21 (20, 4%) | |
| Cancer related death | | |
| No | 87 (84, 5%) | |
| Yes | 16 (15, 5%) | |
Figure 2MiR-21 and miR-126 expression in association to clinical parameters. Box-Whisker-Plot: relative expression of miR-21 and miR −126 was analysed by the ΔΔCt method in RCC cases and subsequently the cases were divided into subgroups based on tumor grade (A), T stage (B) the presence of synchrone metastasis (C) or cancer related death (CRD) (D). P-values were calculated by students paired t-test (C and D) or by ANOVA (A and B).
Figure 3ROC curve of miRNA risk scores (miR-21, miR-126 and CRS) and Kaplan Meier survival analysis of cancer specific survival (CSS) in RCC patients stratified by miR-21, miR-126 and CRS expression data. A) ROC curves; the cross indicates the selected cutoff score for miR-21, miR126 or CRS resulting in highest sensitivity and specificity. The used cut-off scores were indicated in the graphs. B) Kaplan Meier curves with log rank test and numbers of patients stratified by the calculated risk scores of miR-21, miR-126 and CRS.
Figure 4Risk stratification of patients with or without cancer related death (CRD) Proportion of patients without (A and C) or with (B and D) cancer related death stratified by the risk score of miR-21 (high risk: miR-21 expression > 1.61), miR-126 (high risk miR-126 expression <0.57) or CRS (combined high risk score > 6.82). The proportion of correctly or incorrectly classified patients of the learning cohort (A and B) and the test cohort (C and D) are shown. The proportion of correctly classified patients at low risk (A and B) is shown as grey bars and indicates the sensitivity of the different risk scores. B and D show the proportion of correctly classified patients at high risk as black bars and indicate the specificity of the different risk scores. For both cohorts the CRS shows higher true positive rate and lower false positive rate as the separated miR-21 and miR-126 risk scores.
Specificity and sensitivity for the CRS in the learning (A) and test data set (B)
| CRD (n = 16) | 14 | 2 | 87,50 |
| no CRD (n = 87) | 22 | 65 | 74,71 |
| overall | | | 76,70 |
| CRD (n = 15) | 13 | 2 | 86,67 |
| no CRD (n = 20) | 3 | 17 | 85,00 |
| overall | 85,71 | ||
CRD: cancer related death; CRS: combined risk score for miR-21 and miR-126.
Univariate and multivariate Cox regression analysis determined by relative goodness of fit with AIC (p < 0.00001; Wald-Test) including the combined risk score (CRS) as variable
| CRS | 103 | 1.107 (1.06-1.12) | 2.608e-05 | 19.37 (4.06-92.44) | 0,0002 | 3.97 (3.0-11.83) |
| Grading | 103 | 10.97 (3.90-30.9) | 5.847e-06 | 13.88 (4.28-45.08) | 1,20e-05 | 3.36 (2.5-11.42) |
| Age | 103 | 0.99 (0.95-1.03) | 0.71 | | | |
| pT | 103 | 1.76 (1.25-2.47) | 0.001 | | | |
| Gender | 103 | 1.61 (0.55-4.67) | 0.38 | | | |
| Wald test | p = 7.17e-07 | |||||