| Literature DB >> 24427104 |
Lilianna Chęcińska1, Borys Ośmiałowski2, Arto Valkonen3.
Abstract
In the crystal structure of the title salt, C10H16N3O(+)·C7H5O2 (-), the cations and anions are linked to each other via N-H⋯O hydrogen bonds, forming infinite chains running along [010]. The crystal structure also features C-H⋯O and π-π stacking inter-actions, which assemble the chains into supra-molecular layers parallel to (100). The π-π stacking inter-actions are observed between the pyridine rings of inversion-related cations with a centroid-centroid distance of 3.867 (2) Å.Entities:
Year: 2013 PMID: 24427104 PMCID: PMC3884507 DOI: 10.1107/S1600536813023787
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H16N3O+·C7H5O2− | |
| Monoclinic, | Mo |
| Cell parameters from 4257 reflections | |
| θ = 0.4–28.3° | |
| µ = 0.09 mm−1 | |
| β = 91.967 (2)° | |
| Block, colourless | |
| 0.13 × 0.10 × 0.08 mm |
| Bruker–Nonius KappaCCD diffractometer with APEXII detector | 3724 independent reflections |
| Radiation source: fine-focus sealed tube | 2054 reflections with |
| Graphite monochromator | |
| Detector resolution: 9 pixels mm-1 | θmax = 27.5°, θmin = 2.5° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 10993 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3724 reflections | (Δ/σ)max < 0.001 |
| 220 parameters | Δρmax = 0.24 e Å−3 |
| 4 restraints | Δρmin = −0.28 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| O8 | 0.69413 (12) | 0.1535 (3) | 0.54656 (10) | 0.0370 (5) | |
| N1 | 0.57982 (12) | 0.6015 (4) | 0.39112 (11) | 0.0205 (5) | |
| H1 | 0.6221 (14) | 0.710 (4) | 0.3842 (13) | 0.025* | |
| N6 | 0.48943 (14) | 0.7758 (4) | 0.30603 (12) | 0.0278 (5) | |
| H6A | 0.5311 (15) | 0.882 (4) | 0.2960 (14) | 0.033* | |
| H6B | 0.4404 (14) | 0.774 (4) | 0.2764 (13) | 0.033* | |
| N7 | 0.68521 (13) | 0.4637 (4) | 0.47095 (11) | 0.0231 (5) | |
| H7 | 0.7141 (15) | 0.580 (4) | 0.4546 (13) | 0.028* | |
| C2 | 0.60154 (15) | 0.4307 (4) | 0.43895 (13) | 0.0223 (6) | |
| C3 | 0.54405 (15) | 0.2505 (4) | 0.45137 (14) | 0.0249 (6) | |
| H3 | 0.5582 | 0.1307 | 0.4850 | 0.030* | |
| C4 | 0.46378 (16) | 0.2513 (4) | 0.41222 (14) | 0.0261 (6) | |
| H4 | 0.4225 | 0.1295 | 0.4200 | 0.031* | |
| C5 | 0.44278 (15) | 0.4204 (4) | 0.36334 (13) | 0.0227 (6) | |
| H5 | 0.3881 | 0.4149 | 0.3369 | 0.027* | |
| C6 | 0.50276 (15) | 0.6023 (4) | 0.35252 (13) | 0.0209 (6) | |
| C8 | 0.72715 (16) | 0.3289 (4) | 0.52242 (14) | 0.0234 (6) | |
| C9 | 0.81731 (15) | 0.4228 (4) | 0.54969 (13) | 0.0219 (6) | |
| C10 | 0.79992 (16) | 0.5515 (5) | 0.61949 (14) | 0.0293 (6) | |
| H10A | 0.7718 | 0.4443 | 0.6526 | 0.044* | |
| H10B | 0.7608 | 0.6852 | 0.6096 | 0.044* | |
| H10C | 0.8560 | 0.6072 | 0.6409 | 0.044* | |
| C11 | 0.87823 (17) | 0.2125 (4) | 0.56515 (16) | 0.0326 (7) | |
| H11A | 0.8896 | 0.1308 | 0.5204 | 0.049* | |
| H11B | 0.8497 | 0.1049 | 0.5980 | 0.049* | |
| H11C | 0.9342 | 0.2675 | 0.5869 | 0.049* | |
| C12 | 0.86140 (15) | 0.5877 (5) | 0.49737 (14) | 0.0263 (6) | |
| H12A | 0.8723 | 0.5037 | 0.4529 | 0.040* | |
| H12B | 0.9176 | 0.6436 | 0.5185 | 0.040* | |
| H12C | 0.8225 | 0.7216 | 0.4871 | 0.040* | |
| O13A | 0.71169 (10) | −0.1201 (3) | 0.37777 (10) | 0.0287 (5) | |
| O13B | 0.64016 (11) | 0.0950 (3) | 0.29481 (10) | 0.0289 (5) | |
| C13 | 0.70775 (15) | 0.0432 (4) | 0.33191 (13) | 0.0215 (6) | |
| C14 | 0.79105 (15) | 0.1829 (4) | 0.32285 (13) | 0.0203 (6) | |
| C15 | 0.87128 (15) | 0.0994 (4) | 0.35068 (13) | 0.0220 (6) | |
| H15 | 0.8731 | −0.0436 | 0.3766 | 0.026* | |
| C16 | 0.94848 (16) | 0.2232 (4) | 0.34092 (14) | 0.0255 (6) | |
| H16 | 1.0031 | 0.1649 | 0.3600 | 0.031* | |
| C17 | 0.94615 (16) | 0.4311 (4) | 0.30351 (14) | 0.0271 (6) | |
| H17 | 0.9992 | 0.5155 | 0.2966 | 0.033* | |
| C18 | 0.86638 (16) | 0.5174 (5) | 0.27596 (14) | 0.0279 (6) | |
| H18 | 0.8647 | 0.6621 | 0.2509 | 0.033* | |
| C19 | 0.78894 (16) | 0.3920 (4) | 0.28499 (13) | 0.0245 (6) | |
| H19 | 0.7345 | 0.4494 | 0.2652 | 0.029* |
| O8 | 0.0319 (11) | 0.0331 (11) | 0.0450 (13) | −0.0155 (8) | −0.0117 (9) | 0.0167 (10) |
| N1 | 0.0153 (11) | 0.0213 (11) | 0.0248 (12) | −0.0069 (8) | 0.0000 (8) | 0.0002 (9) |
| N6 | 0.0206 (12) | 0.0284 (13) | 0.0339 (14) | −0.0070 (9) | −0.0076 (10) | 0.0059 (11) |
| N7 | 0.0175 (11) | 0.0242 (12) | 0.0275 (13) | −0.0068 (9) | −0.0028 (9) | 0.0046 (10) |
| C2 | 0.0197 (13) | 0.0264 (14) | 0.0208 (14) | −0.0036 (10) | 0.0006 (10) | −0.0012 (11) |
| C3 | 0.0208 (13) | 0.0273 (15) | 0.0266 (15) | −0.0069 (10) | 0.0002 (11) | 0.0067 (11) |
| C4 | 0.0202 (14) | 0.0284 (14) | 0.0297 (16) | −0.0106 (11) | 0.0016 (11) | −0.0020 (12) |
| C5 | 0.0166 (12) | 0.0281 (14) | 0.0234 (14) | −0.0049 (10) | −0.0005 (10) | −0.0004 (11) |
| C6 | 0.0165 (12) | 0.0254 (14) | 0.0210 (14) | −0.0004 (10) | 0.0029 (10) | −0.0029 (11) |
| C8 | 0.0235 (13) | 0.0221 (14) | 0.0246 (15) | −0.0043 (11) | −0.0006 (11) | 0.0012 (11) |
| C9 | 0.0172 (12) | 0.0227 (13) | 0.0255 (14) | −0.0018 (10) | −0.0039 (10) | −0.0019 (11) |
| C10 | 0.0215 (13) | 0.0354 (16) | 0.0309 (15) | −0.0046 (11) | −0.0012 (11) | −0.0032 (13) |
| C11 | 0.0264 (15) | 0.0257 (16) | 0.0449 (19) | 0.0005 (11) | −0.0076 (12) | 0.0017 (13) |
| C12 | 0.0171 (13) | 0.0323 (15) | 0.0295 (15) | −0.0046 (11) | −0.0007 (10) | −0.0001 (12) |
| O13A | 0.0198 (9) | 0.0276 (10) | 0.0384 (12) | −0.0058 (7) | −0.0032 (8) | 0.0102 (9) |
| O13B | 0.0199 (9) | 0.0326 (11) | 0.0335 (11) | −0.0030 (7) | −0.0069 (8) | 0.0078 (9) |
| C13 | 0.0201 (13) | 0.0225 (14) | 0.0220 (14) | −0.0029 (10) | 0.0016 (10) | −0.0010 (12) |
| C14 | 0.0186 (13) | 0.0227 (14) | 0.0197 (14) | −0.0027 (10) | 0.0022 (10) | −0.0021 (11) |
| C15 | 0.0214 (13) | 0.0219 (13) | 0.0227 (14) | −0.0017 (10) | 0.0019 (10) | 0.0010 (11) |
| C16 | 0.0192 (13) | 0.0288 (15) | 0.0287 (15) | −0.0016 (10) | 0.0012 (10) | −0.0017 (12) |
| C17 | 0.0251 (14) | 0.0302 (15) | 0.0264 (15) | −0.0118 (11) | 0.0062 (11) | −0.0010 (12) |
| C18 | 0.0329 (15) | 0.0231 (14) | 0.0278 (15) | −0.0058 (11) | 0.0025 (12) | 0.0051 (12) |
| C19 | 0.0264 (14) | 0.0230 (14) | 0.0242 (14) | −0.0012 (11) | −0.0008 (11) | 0.0010 (12) |
| O8—C8 | 1.214 (3) | C10—H10B | 0.9800 |
| N1—C6 | 1.352 (3) | C10—H10C | 0.9800 |
| N1—C2 | 1.358 (3) | C11—H11A | 0.9800 |
| N1—H1 | 0.905 (16) | C11—H11B | 0.9800 |
| N6—C6 | 1.330 (3) | C11—H11C | 0.9800 |
| N6—H6A | 0.899 (17) | C12—H12A | 0.9800 |
| N6—H6B | 0.913 (16) | C12—H12B | 0.9800 |
| N7—C8 | 1.373 (3) | C12—H12C | 0.9800 |
| N7—C2 | 1.396 (3) | O13A—C13 | 1.268 (3) |
| N7—H7 | 0.859 (17) | O13B—C13 | 1.253 (3) |
| C2—C3 | 1.373 (3) | C13—C14 | 1.507 (3) |
| C3—C4 | 1.398 (3) | C14—C19 | 1.389 (3) |
| C3—H3 | 0.9500 | C14—C15 | 1.390 (3) |
| C4—C5 | 1.361 (3) | C15—C16 | 1.384 (3) |
| C4—H4 | 0.9500 | C15—H15 | 0.9500 |
| C5—C6 | 1.400 (3) | C16—C17 | 1.379 (4) |
| C5—H5 | 0.9500 | C16—H16 | 0.9500 |
| C8—C9 | 1.538 (3) | C17—C18 | 1.388 (4) |
| C9—C12 | 1.529 (3) | C17—H17 | 0.9500 |
| C9—C10 | 1.531 (3) | C18—C19 | 1.389 (3) |
| C9—C11 | 1.536 (3) | C18—H18 | 0.9500 |
| C10—H10A | 0.9800 | C19—H19 | 0.9500 |
| C6—N1—C2 | 122.7 (2) | C9—C10—H10C | 109.5 |
| C6—N1—H1 | 121.5 (16) | H10A—C10—H10C | 109.5 |
| C2—N1—H1 | 115.6 (16) | H10B—C10—H10C | 109.5 |
| C6—N6—H6A | 123.2 (17) | C9—C11—H11A | 109.5 |
| C6—N6—H6B | 119.4 (17) | C9—C11—H11B | 109.5 |
| H6A—N6—H6B | 116 (2) | H11A—C11—H11B | 109.5 |
| C8—N7—C2 | 128.1 (2) | C9—C11—H11C | 109.5 |
| C8—N7—H7 | 117.2 (17) | H11A—C11—H11C | 109.5 |
| C2—N7—H7 | 114.7 (17) | H11B—C11—H11C | 109.5 |
| N1—C2—C3 | 120.7 (2) | C9—C12—H12A | 109.5 |
| N1—C2—N7 | 112.5 (2) | C9—C12—H12B | 109.5 |
| C3—C2—N7 | 126.9 (2) | H12A—C12—H12B | 109.5 |
| C2—C3—C4 | 117.0 (2) | C9—C12—H12C | 109.5 |
| C2—C3—H3 | 121.5 | H12A—C12—H12C | 109.5 |
| C4—C3—H3 | 121.5 | H12B—C12—H12C | 109.5 |
| C5—C4—C3 | 122.3 (2) | O13B—C13—O13A | 124.6 (2) |
| C5—C4—H4 | 118.9 | O13B—C13—C14 | 118.9 (2) |
| C3—C4—H4 | 118.9 | O13A—C13—C14 | 116.5 (2) |
| C4—C5—C6 | 119.1 (2) | C19—C14—C15 | 119.4 (2) |
| C4—C5—H5 | 120.4 | C19—C14—C13 | 120.5 (2) |
| C6—C5—H5 | 120.4 | C15—C14—C13 | 120.0 (2) |
| N6—C6—N1 | 117.5 (2) | C16—C15—C14 | 120.4 (2) |
| N6—C6—C5 | 124.3 (2) | C16—C15—H15 | 119.8 |
| N1—C6—C5 | 118.2 (2) | C14—C15—H15 | 119.8 |
| O8—C8—N7 | 122.5 (2) | C17—C16—C15 | 120.0 (2) |
| O8—C8—C9 | 122.4 (2) | C17—C16—H16 | 120.0 |
| N7—C8—C9 | 115.0 (2) | C15—C16—H16 | 120.0 |
| C12—C9—C10 | 110.1 (2) | C16—C17—C18 | 120.1 (2) |
| C12—C9—C11 | 109.3 (2) | C16—C17—H17 | 119.9 |
| C10—C9—C11 | 109.5 (2) | C18—C17—H17 | 119.9 |
| C12—C9—C8 | 113.8 (2) | C17—C18—C19 | 120.0 (2) |
| C10—C9—C8 | 105.9 (2) | C17—C18—H18 | 120.0 |
| C11—C9—C8 | 108.1 (2) | C19—C18—H18 | 120.0 |
| C9—C10—H10A | 109.5 | C14—C19—C18 | 120.0 (2) |
| C9—C10—H10B | 109.5 | C14—C19—H19 | 120.0 |
| H10A—C10—H10B | 109.5 | C18—C19—H19 | 120.0 |
| C6—N1—C2—C3 | −1.4 (4) | O8—C8—C9—C10 | −79.0 (3) |
| C6—N1—C2—N7 | 178.4 (2) | N7—C8—C9—C10 | 98.3 (3) |
| C8—N7—C2—N1 | 178.5 (2) | O8—C8—C9—C11 | 38.3 (3) |
| C8—N7—C2—C3 | −1.8 (4) | N7—C8—C9—C11 | −144.3 (2) |
| N1—C2—C3—C4 | 0.7 (4) | O13B—C13—C14—C19 | 12.4 (4) |
| N7—C2—C3—C4 | −179.1 (2) | O13A—C13—C14—C19 | −167.2 (2) |
| C2—C3—C4—C5 | 0.6 (4) | O13B—C13—C14—C15 | −165.7 (2) |
| C3—C4—C5—C6 | −1.1 (4) | O13A—C13—C14—C15 | 14.7 (3) |
| C2—N1—C6—N6 | −178.5 (2) | C19—C14—C15—C16 | 0.1 (4) |
| C2—N1—C6—C5 | 0.8 (4) | C13—C14—C15—C16 | 178.2 (2) |
| C4—C5—C6—N6 | 179.6 (3) | C14—C15—C16—C17 | 0.1 (4) |
| C4—C5—C6—N1 | 0.4 (4) | C15—C16—C17—C18 | 0.4 (4) |
| C2—N7—C8—O8 | 1.0 (4) | C16—C17—C18—C19 | −1.1 (4) |
| C2—N7—C8—C9 | −176.4 (2) | C15—C14—C19—C18 | −0.8 (4) |
| O8—C8—C9—C12 | 159.9 (2) | C13—C14—C19—C18 | −178.9 (2) |
| N7—C8—C9—C12 | −22.8 (3) | C17—C18—C19—C14 | 1.3 (4) |
| H··· | ||||
| N1—H1···O13 | 0.91 (2) | 1.67 (2) | 2.571 (2) | 170 (2) |
| N6—H6 | 0.90 (2) | 2.05 (2) | 2.934 (3) | 167 (2) |
| N6—H6 | 0.91 (2) | 2.05 (2) | 2.869 (3) | 149 (2) |
| N7—H7···O13 | 0.86 (2) | 2.24 (2) | 2.984 (3) | 146 (2) |
| C4—H4···O8iii | 0.95 | 2.49 | 3.433 (3) | 172 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯O13 | 0.91 (2) | 1.67 (2) | 2.571 (2) | 170 (2) |
| N6—H6 | 0.90 (2) | 2.05 (2) | 2.934 (3) | 167 (2) |
| N6—H6 | 0.91 (2) | 2.05 (2) | 2.869 (3) | 149 (2) |
| N7—H7⋯O13 | 0.86 (2) | 2.24 (2) | 2.984 (3) | 146 (2) |
| C4—H4⋯O8iii | 0.95 | 2.49 | 3.433 (3) | 172 |
Symmetry codes: (i) ; (ii) ; (iii) .