Literature DB >> 24427101

(+)-(S)-N-[(1-Benzo-thio-phen-2-yl)methyl-idene]-1-(naphthalen-1-yl)ethyl-amine.

Guadalupe Hernández-Téllez1, Oscar Portillo-Moreno1, René Gutiérrez1, Francisco J Rios-Merino2, Angel Mendoza2.   

Abstract

In the title compound, C21H17NS, the C=N double bond shows an E conformation. The dihedral angle between the mean planes of the naphthyl residue and the n class="Chemical">benzo-thio-phene residue is 89.14 (6)°. The crystal packing is stabilized by inter-molecular C-H⋯π inter-actions, building a ribbon structure along the a axis.

Entities:  

Year:  2013        PMID: 24427101      PMCID: PMC3884384          DOI: 10.1107/S1600536813023611

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For Schiff bases, see: García et al. (2011 ▶); Bernès et al. (2010 ▶); Jeon et al. (2005 ▶); Noyori (2005 ▶); Tanaka & Toda (2000 ▶).

Experimental

Crystal data

C21H17NS M = 315.42 Orthorhombic, a = 5.6423 (3) Å b = 8.0808 (4) Å c = 36.3864 (19) Å V = 1659.01 (15) Å3 Z = 4 Cu Kα radiation μ = 1.70 mm−1 T = 298 K 0.93 × 0.17 × 0.06 mm

Data collection

Oxford Diffraction Xcalibur (Atlas, Gemini) diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2006 ▶) T min = 0.665, T max = 1 8690 measured reflections 2844 independent reflections 2417 reflections with I > 2σ(I) R int = 0.053

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.092 S = 1.01 2844 reflections 208 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.18 e Å−3 Absolute structure: Flack parameter determined using 839 quotients [(I+)−(I−)]/[(I+)+(I−)] (Parsons & Flack (2004 ▶) Absolute structure parameter: 0.021 (17) Data collection: CrysAlis PRO (Oxford Diffraction, 2006 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008 ▶); molecular graphics: SHELXL2013; software used to prepare material for publication: SHELXL2013. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813023611/bt6929sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813023611/bt6929Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813023611/bt6929Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H17NSF(000) = 664
Mr = 315.42Dx = 1.263 Mg m3
Orthorhombic, P212121Cu Kα radiation, λ = 1.54184 Å
Hall symbol: P 2ac 2abCell parameters from 2302 reflections
a = 5.6423 (3) Åθ = 4.8–73.7°
b = 8.0808 (4) ŵ = 1.70 mm1
c = 36.3864 (19) ÅT = 298 K
V = 1659.01 (15) Å3Plate, translucent colourless
Z = 40.93 × 0.17 × 0.06 mm
Oxford Diffraction Xcalibur (Atlas, Gemini) diffractometer2844 independent reflections
Graphite monochromator2417 reflections with I > 2σ(I)
Detector resolution: 10.5564 pixels mm-1Rint = 0.053
ω scansθmax = 66.1°, θmin = 4.9°
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2006)h = −6→6
Tmin = 0.665, Tmax = 1k = −9→9
8690 measured reflectionsl = −43→43
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.040w = 1/[σ2(Fo2) + (0.0363P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.092(Δ/σ)max < 0.001
S = 1.01Δρmax = 0.25 e Å3
2844 reflectionsΔρmin = −0.18 e Å3
208 parametersAbsolute structure: Flack parameter determined using 839 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons & Flack (2004)
0 restraintsAbsolute structure parameter: 0.021 (17)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
S10.66160 (15)0.33795 (10)0.20762 (2)0.0504 (2)
C130.8326 (7)0.6220 (4)0.07300 (9)0.0526 (8)
C50.8422 (8)0.4832 (4)0.30726 (10)0.0559 (8)
H50.96650.54390.31730.067*
C90.6413 (6)0.3627 (4)0.25514 (9)0.0453 (7)
C30.9946 (6)0.4998 (4)0.24067 (10)0.0492 (8)
H31.13230.55990.24510.059*
C40.8335 (6)0.4527 (4)0.26915 (10)0.0467 (7)
C20.9289 (5)0.4490 (4)0.20692 (11)0.0485 (7)
C11.0499 (6)0.4771 (4)0.17269 (10)0.0506 (8)
H11.1820.5460.17250.061*
C60.6675 (8)0.4233 (5)0.32929 (11)0.0612 (9)
H60.67350.44350.35440.073*
N10.9833 (5)0.4116 (4)0.14263 (9)0.0557 (7)
C120.9580 (6)0.4687 (4)0.07747 (10)0.0524 (8)
C80.4653 (6)0.3017 (4)0.27776 (11)0.0553 (9)
H80.33980.24120.26810.066*
C101.1270 (7)0.4460 (5)0.10929 (10)0.0563 (9)
H101.21550.5490.1130.068*
C190.6218 (8)0.5002 (6)0.02083 (11)0.0696 (11)
H190.510.50860.00210.083*
C180.6615 (8)0.6360 (5)0.04455 (10)0.0626 (9)
C111.3029 (8)0.3034 (6)0.10488 (12)0.0797 (13)
H11A1.40380.29830.12610.12*
H11B1.39750.32140.08330.12*
H11C1.21770.20120.10250.12*
C170.5403 (10)0.7867 (6)0.04014 (15)0.0848 (15)
H170.42720.79660.02170.102*
C70.4790 (7)0.3319 (5)0.31476 (11)0.0611 (10)
H70.3620.29130.33030.073*
C140.8719 (9)0.7621 (5)0.09573 (12)0.0659 (11)
H140.98160.75520.11470.079*
C150.7523 (10)0.9062 (6)0.09026 (14)0.0851 (15)
H150.78250.9970.10520.102*
C200.7450 (8)0.3587 (6)0.02515 (12)0.0700 (11)
H200.71820.27040.00930.084*
C160.5852 (10)0.9180 (6)0.06237 (15)0.0950 (18)
H160.50341.01670.05890.114*
C210.9123 (7)0.3431 (5)0.05316 (10)0.0610 (9)
H210.99560.24430.05540.073*
U11U22U33U12U13U23
S10.0487 (4)0.0531 (4)0.0493 (4)−0.0025 (4)−0.0075 (4)−0.0035 (4)
C130.0587 (19)0.0561 (19)0.0431 (17)0.0004 (18)0.0125 (17)0.0075 (14)
C50.059 (2)0.0567 (19)0.0522 (19)−0.002 (2)−0.0078 (19)−0.0037 (16)
C90.0447 (16)0.0411 (14)0.0501 (17)0.0052 (15)−0.0051 (16)0.0011 (13)
C30.0460 (19)0.0482 (17)0.054 (2)−0.0028 (15)−0.0055 (16)−0.0030 (15)
C40.0446 (17)0.0415 (14)0.0541 (18)0.0071 (16)−0.0046 (18)−0.0002 (14)
C20.0472 (17)0.0431 (16)0.0552 (19)0.0040 (13)−0.0013 (17)0.0042 (16)
C10.0484 (18)0.0518 (18)0.051 (2)0.0041 (15)−0.0027 (17)0.0030 (16)
C60.070 (2)0.065 (2)0.0485 (19)0.005 (2)0.002 (2)−0.0040 (18)
N10.0539 (17)0.0614 (17)0.0517 (18)0.0019 (15)0.0030 (14)0.0063 (15)
C120.055 (2)0.0558 (18)0.0461 (19)0.0009 (17)0.0109 (17)0.0041 (16)
C80.0486 (19)0.0497 (19)0.068 (2)−0.0031 (16)−0.0031 (18)−0.0008 (17)
C100.058 (2)0.061 (2)0.0497 (19)−0.0035 (18)0.0073 (18)0.0045 (16)
C190.077 (3)0.082 (3)0.049 (2)−0.005 (2)−0.004 (2)0.006 (2)
C180.067 (2)0.070 (2)0.0502 (19)0.007 (2)0.008 (2)0.0127 (18)
C110.070 (3)0.103 (4)0.066 (3)0.022 (3)0.012 (2)0.017 (3)
C170.093 (3)0.090 (3)0.072 (3)0.025 (3)−0.001 (3)0.015 (3)
C70.061 (2)0.060 (2)0.062 (2)0.003 (2)0.0126 (19)0.009 (2)
C140.085 (3)0.059 (2)0.054 (2)0.003 (2)0.010 (2)0.0002 (17)
C150.127 (4)0.060 (2)0.069 (3)0.007 (3)0.022 (3)0.000 (2)
C200.087 (3)0.070 (3)0.053 (2)−0.009 (2)0.003 (2)−0.009 (2)
C160.128 (5)0.073 (3)0.084 (4)0.039 (3)0.020 (3)0.016 (3)
C210.073 (2)0.0584 (19)0.052 (2)0.0054 (18)0.0099 (18)−0.0017 (19)
S1—C91.744 (3)C8—H80.93
S1—C21.755 (3)C10—C111.529 (6)
C13—C141.419 (5)C10—H100.98
C13—C181.420 (6)C19—C201.347 (6)
C13—C121.436 (5)C19—C181.414 (6)
C5—C61.359 (6)C19—H190.93
C5—C41.409 (5)C18—C171.406 (6)
C5—H50.93C11—H11A0.96
C9—C81.380 (5)C11—H11B0.96
C9—C41.402 (5)C11—H11C0.96
C3—C21.347 (5)C17—C161.358 (7)
C3—C41.430 (5)C17—H170.93
C3—H30.93C7—H70.93
C2—C11.438 (5)C14—C151.361 (6)
C1—N11.272 (5)C14—H140.93
C1—H10.93C15—C161.388 (7)
C6—C71.399 (6)C15—H150.93
C6—H60.93C20—C211.395 (6)
N1—C101.485 (5)C20—H200.93
C12—C211.371 (6)C16—H160.93
C12—C101.511 (6)C21—H210.93
C8—C71.371 (6)
C9—S1—C290.70 (18)C12—C10—H10108.9
C14—C13—C18117.9 (4)C11—C10—H10108.9
C14—C13—C12123.0 (4)C20—C19—C18120.4 (4)
C18—C13—C12119.1 (3)C20—C19—H19119.8
C6—C5—C4119.5 (4)C18—C19—H19119.8
C6—C5—H5120.2C17—C18—C19121.7 (4)
C4—C5—H5120.2C17—C18—C13118.9 (4)
C8—C9—C4121.6 (3)C19—C18—C13119.4 (4)
C8—C9—S1126.7 (3)C10—C11—H11A109.5
C4—C9—S1111.7 (3)C10—C11—H11B109.5
C2—C3—C4113.9 (3)H11A—C11—H11B109.5
C2—C3—H3123.1C10—C11—H11C109.5
C4—C3—H3123.1H11A—C11—H11C109.5
C9—C4—C5118.4 (4)H11B—C11—H11C109.5
C9—C4—C3111.5 (3)C16—C17—C18121.2 (5)
C5—C4—C3130.1 (4)C16—C17—H17119.4
C3—C2—C1127.6 (3)C18—C17—H17119.4
C3—C2—S1112.3 (3)C8—C7—C6120.5 (4)
C1—C2—S1120.1 (3)C8—C7—H7119.7
N1—C1—C2122.6 (3)C6—C7—H7119.7
N1—C1—H1118.7C15—C14—C13121.3 (5)
C2—C1—H1118.7C15—C14—H14119.3
C5—C6—C7121.1 (4)C13—C14—H14119.3
C5—C6—H6119.5C14—C15—C16120.2 (5)
C7—C6—H6119.5C14—C15—H15119.9
C1—N1—C10117.6 (3)C16—C15—H15119.9
C21—C12—C13118.2 (3)C19—C20—C21120.7 (4)
C21—C12—C10121.5 (3)C19—C20—H20119.6
C13—C12—C10120.2 (3)C21—C20—H20119.6
C7—C8—C9118.8 (4)C17—C16—C15120.6 (4)
C7—C8—H8120.6C17—C16—H16119.7
C9—C8—H8120.6C15—C16—H16119.7
N1—C10—C12107.7 (3)C12—C21—C20122.1 (4)
N1—C10—C11107.4 (3)C12—C21—H21118.9
C12—C10—C11114.9 (3)C20—C21—H21118.9
N1—C10—H10108.9
C2—S1—C9—C8−178.8 (3)C1—N1—C10—C1195.0 (4)
C2—S1—C9—C40.0 (2)C21—C12—C10—N1−99.0 (4)
C8—C9—C4—C5−1.2 (5)C13—C12—C10—N178.2 (4)
S1—C9—C4—C5179.9 (3)C21—C12—C10—C1120.6 (5)
C8—C9—C4—C3178.8 (3)C13—C12—C10—C11−162.1 (3)
S1—C9—C4—C3−0.1 (3)C20—C19—C18—C17178.3 (4)
C6—C5—C4—C90.9 (5)C20—C19—C18—C130.0 (6)
C6—C5—C4—C3−179.1 (3)C14—C13—C18—C170.2 (6)
C2—C3—C4—C90.2 (4)C12—C13—C18—C17−179.6 (4)
C2—C3—C4—C5−179.9 (4)C14—C13—C18—C19178.5 (4)
C4—C3—C2—C1179.4 (3)C12—C13—C18—C19−1.2 (6)
C4—C3—C2—S1−0.2 (4)C19—C18—C17—C16−177.9 (5)
C9—S1—C2—C30.1 (3)C13—C18—C17—C160.4 (7)
C9—S1—C2—C1−179.5 (3)C9—C8—C7—C60.2 (6)
C3—C2—C1—N1173.8 (4)C5—C6—C7—C8−0.5 (6)
S1—C2—C1—N1−6.7 (5)C18—C13—C14—C15−0.9 (6)
C4—C5—C6—C70.0 (6)C12—C13—C14—C15178.9 (4)
C2—C1—N1—C10−178.2 (3)C13—C14—C15—C161.0 (7)
C14—C13—C12—C21−177.7 (4)C18—C19—C20—C210.4 (7)
C18—C13—C12—C212.0 (5)C18—C17—C16—C15−0.3 (8)
C14—C13—C12—C105.0 (5)C14—C15—C16—C17−0.4 (8)
C18—C13—C12—C10−175.3 (3)C13—C12—C21—C20−1.7 (6)
C4—C9—C8—C70.7 (5)C10—C12—C21—C20175.6 (3)
S1—C9—C8—C7179.4 (3)C19—C20—C21—C120.4 (6)
C1—N1—C10—C12−140.7 (3)
D—H···AD—HH···AD···AD—H···A
C8—H8···Cg1i0.932.733.491 (4)139
C11—H11B···Cg2ii0.962.593.724 (5)149
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the S1/C2/C3/C4/C9, C12/C13/C18/C19/C20/C21 rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
C8—H8⋯Cg1i 0.932.733.491 (4)139
C11—H11BCg2ii 0.962.593.724 (5)149

Symmetry codes: (i) ; (ii) .

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