Literature DB >> 24427089

Fluazinam.

Youngeun Jeon1, Jineun Kim1, Sangjin Lee1, Tae Ho Kim1.   

Abstract

In the asymmetric unit of the title compound {systematic name: 3-chloro-N-[3-chloro-5-(tri-fluoro-meth-yl)pyridin-2-yl]-2,6-di-nitro-4-(tri-fluoro-methyl)-aniline}, C13H4Cl2F6N4O4, which is the fungicide fluazinam, the dihedral angle between the pyridine and benzene ring planes is 42.20 (4)°. In the crystal, pairs of N-H⋯F hydrogen bonds link the mol-ecules into inversion dimers which are linked by C-Cl⋯π [Cl⋯ring centroid = 3.3618 (4) A °] and N-O⋯π [O⋯ring centroid = 3.1885 (16) Å] inter-actions into chains along [100]. In addition, short Cl⋯Cl, O⋯Cl, and F⋯F contacts [3.4676 (7), 3.2371 (13) and 2.7910 (15) Å] are present which connect the chains, yielding a three-dimensional network.

Entities:  

Year:  2013        PMID: 24427089      PMCID: PMC3884378          DOI: 10.1107/S1600536813023210

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For information on the toxicity and fungicidal properties of the title compound, see: Yoshida & Yukimoto (1993 ▶); Draper et al. (2003 ▶). For a related structure, see: McCullough et al. (1972 ▶).

Experimental

Crystal data

C13H4Cl2F6N4O4 M = 465.10 Triclinic, a = 8.9546 (1) Å b = 9.0724 (1) Å c = 10.6818 (2) Å α = 79.556 (1)° β = 75.420 (1)° γ = 83.451 (1)° V = 823.79 (2) Å3 Z = 2 Mo Kα radiation μ = 0.49 mm−1 T = 173 K 0.30 × 0.18 × 0.15 mm

Data collection

Bruker APEXII CCD detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2006 ▶) T min = 0.867, T max = 0.930 15193 measured reflections 4096 independent reflections 3662 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.085 S = 1.04 4096 reflections 262 parameters H-atom parameters constrained Δρmax = 0.47 e Å−3 Δρmin = −0.45 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813023210/kj2230sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813023210/kj2230Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813023210/kj2230Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H4Cl2F6N4O4Z = 2
Mr = 465.10F(000) = 460
Triclinic, P1Dx = 1.875 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.9546 (1) ÅCell parameters from 8261 reflections
b = 9.0724 (1) Åθ = 2.4–28.3°
c = 10.6818 (2) ŵ = 0.49 mm1
α = 79.556 (1)°T = 173 K
β = 75.420 (1)°Block, yellow
γ = 83.451 (1)°0.30 × 0.18 × 0.15 mm
V = 823.79 (2) Å3
Bruker APEXII CCD detector diffractometer4096 independent reflections
Radiation source: fine-focus sealed tube3662 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.022
φ and ω scansθmax = 28.4°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2006)h = −11→11
Tmin = 0.867, Tmax = 0.930k = −12→10
15193 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.085H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0402P)2 + 0.3959P] where P = (Fo2 + 2Fc2)/3
4096 reflections(Δ/σ)max < 0.001
262 parametersΔρmax = 0.47 e Å3
0 restraintsΔρmin = −0.45 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.83432 (5)0.72367 (4)0.34806 (4)0.03069 (10)
Cl20.43809 (5)0.32745 (5)0.99480 (4)0.03760 (11)
F11.06852 (11)0.34123 (11)0.15585 (9)0.0342 (2)
F20.90981 (11)0.53398 (12)0.12664 (9)0.0369 (2)
F31.11164 (11)0.55470 (11)0.19484 (10)0.0357 (2)
F40.25749 (13)−0.25110 (12)0.84106 (12)0.0484 (3)
F50.07528 (12)−0.07681 (13)0.86228 (14)0.0542 (3)
F60.17049 (16)−0.17401 (14)1.02625 (11)0.0572 (3)
N10.63148 (15)0.61200 (13)0.60382 (12)0.0257 (3)
N20.82927 (13)0.07922 (13)0.58834 (12)0.0239 (2)
N30.62868 (14)0.31709 (14)0.72658 (11)0.0234 (2)
H30.63290.37640.78210.028*
N40.52522 (14)0.10739 (14)0.69279 (12)0.0240 (2)
O10.51649 (16)0.65800 (18)0.56501 (17)0.0595 (4)
O20.6693 (2)0.65407 (19)0.68990 (16)0.0653 (5)
O30.83309 (13)−0.01445 (12)0.51781 (11)0.0321 (2)
O40.84483 (13)0.05111 (13)0.70083 (11)0.0321 (2)
C11.00024 (17)0.46373 (17)0.20469 (14)0.0257 (3)
C20.90782 (15)0.42479 (15)0.34387 (13)0.0210 (3)
C30.82543 (16)0.53636 (15)0.41309 (13)0.0210 (3)
C40.73336 (15)0.49449 (15)0.53729 (13)0.0209 (3)
C50.72421 (15)0.34551 (15)0.60148 (13)0.0197 (3)
C60.81363 (15)0.23826 (15)0.53006 (13)0.0204 (3)
C70.90021 (16)0.27574 (15)0.40317 (13)0.0215 (3)
H70.95480.19870.35640.026*
C80.52749 (15)0.20410 (15)0.77180 (13)0.0208 (3)
C90.42873 (16)0.19730 (16)0.89770 (14)0.0238 (3)
C100.32506 (17)0.08814 (17)0.94103 (14)0.0267 (3)
H100.25640.08181.02530.032*
C110.32343 (17)−0.01298 (16)0.85797 (15)0.0257 (3)
C120.42492 (17)0.00019 (16)0.73578 (15)0.0261 (3)
H120.4234−0.06980.68000.031*
C130.20746 (19)−0.12907 (18)0.89734 (17)0.0332 (3)
U11U22U33U12U13U23
Cl10.0402 (2)0.01712 (16)0.03235 (19)−0.00298 (13)−0.00704 (15)0.00063 (13)
Cl20.0392 (2)0.0455 (2)0.02904 (19)−0.01359 (17)0.00518 (15)−0.02051 (17)
F10.0373 (5)0.0320 (5)0.0270 (4)−0.0033 (4)0.0067 (4)−0.0076 (4)
F20.0418 (5)0.0452 (6)0.0211 (4)0.0003 (4)−0.0090 (4)0.0013 (4)
F30.0328 (5)0.0331 (5)0.0372 (5)−0.0146 (4)−0.0007 (4)0.0018 (4)
F40.0441 (6)0.0303 (5)0.0704 (8)−0.0134 (4)−0.0029 (5)−0.0154 (5)
F50.0303 (5)0.0468 (7)0.0869 (9)−0.0104 (5)−0.0176 (6)−0.0038 (6)
F60.0738 (8)0.0510 (7)0.0409 (6)−0.0357 (6)0.0012 (6)0.0069 (5)
N10.0302 (6)0.0191 (6)0.0264 (6)0.0011 (5)−0.0048 (5)−0.0047 (5)
N20.0218 (6)0.0194 (6)0.0264 (6)−0.0010 (4)0.0003 (4)−0.0018 (5)
N30.0264 (6)0.0231 (6)0.0203 (5)−0.0068 (4)0.0004 (4)−0.0074 (5)
N40.0246 (6)0.0230 (6)0.0237 (6)−0.0033 (4)−0.0018 (4)−0.0067 (5)
O10.0400 (7)0.0658 (10)0.0874 (11)0.0247 (7)−0.0296 (8)−0.0471 (9)
O20.0887 (12)0.0629 (10)0.0628 (10)0.0380 (9)−0.0454 (9)−0.0464 (8)
O30.0366 (6)0.0195 (5)0.0370 (6)−0.0018 (4)0.0002 (5)−0.0092 (4)
O40.0354 (6)0.0287 (6)0.0283 (6)0.0002 (4)−0.0075 (4)0.0039 (4)
C10.0263 (7)0.0261 (7)0.0224 (7)−0.0049 (5)−0.0024 (5)−0.0013 (5)
C20.0211 (6)0.0221 (6)0.0195 (6)−0.0036 (5)−0.0044 (5)−0.0021 (5)
C30.0245 (6)0.0168 (6)0.0227 (6)−0.0032 (5)−0.0081 (5)−0.0009 (5)
C40.0232 (6)0.0184 (6)0.0223 (6)−0.0007 (5)−0.0057 (5)−0.0064 (5)
C50.0199 (6)0.0205 (6)0.0191 (6)−0.0034 (5)−0.0040 (5)−0.0044 (5)
C60.0213 (6)0.0175 (6)0.0218 (6)−0.0019 (5)−0.0042 (5)−0.0025 (5)
C70.0225 (6)0.0199 (6)0.0218 (6)−0.0011 (5)−0.0032 (5)−0.0052 (5)
C80.0205 (6)0.0200 (6)0.0209 (6)−0.0011 (5)−0.0033 (5)−0.0031 (5)
C90.0254 (7)0.0250 (7)0.0209 (6)−0.0016 (5)−0.0027 (5)−0.0072 (5)
C100.0248 (7)0.0299 (8)0.0220 (7)−0.0044 (6)0.0000 (5)−0.0020 (6)
C110.0246 (7)0.0215 (7)0.0296 (7)−0.0035 (5)−0.0054 (5)−0.0005 (6)
C120.0268 (7)0.0219 (7)0.0298 (7)−0.0030 (5)−0.0046 (6)−0.0070 (6)
C130.0321 (8)0.0272 (8)0.0377 (8)−0.0090 (6)−0.0032 (6)−0.0014 (6)
Cl1—C31.7180 (13)N4—C81.3280 (18)
Cl2—C91.7283 (14)N4—C121.3391 (18)
F1—C11.3326 (17)C1—C21.5090 (19)
F2—C11.3366 (17)C2—C71.3868 (19)
F3—C11.3382 (17)C2—C31.3936 (19)
F4—C131.334 (2)C3—C41.3864 (19)
F5—C131.340 (2)C4—C51.4017 (19)
F6—C131.330 (2)C5—C61.3978 (18)
N1—O21.1911 (18)C6—C71.3849 (18)
N1—O11.2084 (18)C7—H70.9500
N1—C41.4834 (17)C8—C91.4065 (19)
N2—O41.2220 (16)C9—C101.373 (2)
N2—O31.2263 (16)C10—C111.391 (2)
N2—C61.4701 (17)C10—H100.9500
N3—C81.3846 (17)C11—C121.384 (2)
N3—C51.3906 (17)C11—C131.495 (2)
N3—H30.8800C12—H120.9500
O2—N1—O1125.30 (14)C7—C6—C5122.46 (12)
O2—N1—C4117.99 (13)C7—C6—N2115.65 (12)
O1—N1—C4116.71 (12)C5—C6—N2121.78 (12)
O4—N2—O3125.24 (12)C6—C7—C2120.52 (13)
O4—N2—C6117.51 (12)C6—C7—H7119.7
O3—N2—C6117.15 (12)C2—C7—H7119.7
C8—N3—C5126.00 (12)N4—C8—N3118.35 (12)
C8—N3—H3117.0N4—C8—C9122.28 (13)
C5—N3—H3117.0N3—C8—C9119.35 (12)
C8—N4—C12118.20 (12)C10—C9—C8119.38 (13)
F1—C1—F2107.50 (12)C10—C9—Cl2120.99 (11)
F1—C1—F3107.14 (12)C8—C9—Cl2119.63 (11)
F2—C1—F3106.99 (12)C9—C10—C11118.07 (13)
F1—C1—C2111.51 (12)C9—C10—H10121.0
F2—C1—C2111.11 (12)C11—C10—H10121.0
F3—C1—C2112.33 (12)C12—C11—C10119.23 (13)
C7—C2—C3119.09 (12)C12—C11—C13120.38 (14)
C7—C2—C1119.92 (12)C10—C11—C13120.30 (14)
C3—C2—C1120.96 (12)N4—C12—C11122.83 (14)
C4—C3—C2118.91 (12)N4—C12—H12118.6
C4—C3—Cl1119.39 (11)C11—C12—H12118.6
C2—C3—Cl1121.70 (10)F6—C13—F4107.38 (14)
C3—C4—C5123.74 (12)F6—C13—F5106.72 (14)
C3—C4—N1118.60 (12)F4—C13—F5106.11 (14)
C5—C4—N1117.56 (12)F6—C13—C11112.20 (14)
N3—C5—C6126.22 (12)F4—C13—C11112.41 (13)
N3—C5—C4118.65 (12)F5—C13—C11111.63 (13)
C6—C5—C4115.13 (12)
F1—C1—C2—C7−1.24 (18)O3—N2—C6—C7−41.24 (17)
F2—C1—C2—C7118.67 (14)O4—N2—C6—C5−40.98 (18)
F3—C1—C2—C7−121.52 (14)O3—N2—C6—C5142.43 (13)
F1—C1—C2—C3−179.22 (12)C5—C6—C7—C23.5 (2)
F2—C1—C2—C3−59.31 (17)N2—C6—C7—C2−172.80 (12)
F3—C1—C2—C360.50 (17)C3—C2—C7—C6−0.9 (2)
C7—C2—C3—C4−2.56 (19)C1—C2—C7—C6−178.88 (12)
C1—C2—C3—C4175.44 (12)C12—N4—C8—N3−178.61 (13)
C7—C2—C3—Cl1177.84 (10)C12—N4—C8—C9−0.1 (2)
C1—C2—C3—Cl1−4.16 (18)C5—N3—C8—N43.9 (2)
C2—C3—C4—C53.7 (2)C5—N3—C8—C9−174.67 (13)
Cl1—C3—C4—C5−176.73 (10)N4—C8—C9—C10−0.5 (2)
C2—C3—C4—N1−172.68 (12)N3—C8—C9—C10178.00 (13)
Cl1—C3—C4—N16.93 (17)N4—C8—C9—Cl2−179.84 (11)
O2—N1—C4—C3−104.70 (18)N3—C8—C9—Cl2−1.30 (19)
O1—N1—C4—C374.84 (19)C8—C9—C10—C110.6 (2)
O2—N1—C4—C578.73 (19)Cl2—C9—C10—C11179.93 (11)
O1—N1—C4—C5−101.72 (17)C9—C10—C11—C12−0.2 (2)
C8—N3—C5—C6−43.9 (2)C9—C10—C11—C13−176.82 (14)
C8—N3—C5—C4135.41 (14)C8—N4—C12—C110.5 (2)
C3—C4—C5—N3179.48 (12)C10—C11—C12—N4−0.4 (2)
N1—C4—C5—N3−4.14 (18)C13—C11—C12—N4176.21 (14)
C3—C4—C5—C6−1.2 (2)C12—C11—C13—F6151.47 (15)
N1—C4—C5—C6175.22 (12)C10—C11—C13—F6−31.9 (2)
N3—C5—C6—C7176.86 (13)C12—C11—C13—F430.3 (2)
C4—C5—C6—C7−2.45 (19)C10—C11—C13—F4−153.10 (14)
N3—C5—C6—N2−7.1 (2)C12—C11—C13—F5−88.78 (18)
C4—C5—C6—N2173.63 (12)C10—C11—C13—F587.80 (19)
O4—N2—C6—C7135.34 (13)
D—H···AD—HH···AD···AD—H···A
N3—H3···F3i0.882.523.0690 (15)121
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N3—H3⋯F3i 0.882.523.0690 (15)121

Symmetry code: (i) .

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