| Literature DB >> 24427009 |
Peng Liang1, Li-Ning Huang2, Xian-Hong Yin1.
Abstract
In the title compound, [Mn(C2O4)(C10H7N3S)] n , the Mn(II) cation is chelated by one 2-(1,3-thia-zol-4-yl)-1H-benzimidazole ligand and two oxalate anions in a distorted N2O4 octa-hedral geometry. Two independent oxalate anions are located on individual inversion centers and bridge the Mn(II) cations into a polymeric chain running along [101]. The thia-zole ring is approximately coplanar with the benzimidazole ring system [dihedral angle = 4.19 (9)°]. In the crystal, classical N-H⋯O hydrogen bonds and weak C-H⋯O hydrogen bonds link the polymeric chains into a three-dimensional supra-molecular architecture.Entities:
Year: 2013 PMID: 24427009 PMCID: PMC3884504 DOI: 10.1107/S1600536813023428
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Mn(C2O4)(C10H7N3S)] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 5023 reflections |
| θ = 2.4–28.3° | |
| µ = 1.14 mm−1 | |
| β = 113.500 (3)° | Block, colorless |
| 0.19 × 0.15 × 0.12 mm | |
| Bruker SMART 1000 diffractometer | 2412 independent reflections |
| Radiation source: fine-focus sealed tube | 2221 reflections with |
| Graphite monochromator | |
| phi and ω scans | θmax = 25.0°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 7273 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2412 reflections | (Δ/σ)max = 0.001 |
| 190 parameters | Δρmax = 0.27 e Å−3 |
| 0 restraints | Δρmin = −0.28 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Mn1 | 0.28290 (3) | 0.932763 (14) | 0.20300 (3) | 0.03109 (11) | |
| S1 | 0.64896 (7) | 0.83770 (4) | −0.00986 (9) | 0.0624 (2) | |
| O1 | 0.39555 (17) | 0.91664 (7) | 0.47096 (16) | 0.0433 (4) | |
| O2 | 0.43698 (18) | 1.03068 (8) | 0.29932 (16) | 0.0484 (4) | |
| O3 | 0.17776 (14) | 0.99693 (8) | −0.02014 (16) | 0.0376 (3) | |
| O4 | 0.05151 (15) | 0.95656 (8) | 0.18979 (16) | 0.0377 (3) | |
| N1 | 0.45900 (19) | 0.87876 (9) | 0.1125 (2) | 0.0413 (4) | |
| N2 | 0.22949 (18) | 0.81054 (8) | 0.17676 (18) | 0.0320 (3) | |
| N3 | 0.2776 (2) | 0.69534 (9) | 0.1121 (2) | 0.0397 (4) | |
| H3 | 0.3214 | 0.6596 | 0.0814 | 0.048* | |
| C1 | 0.0364 (2) | 1.01176 (9) | −0.0610 (2) | 0.0304 (4) | |
| C2 | 0.3161 (2) | 0.76883 (10) | 0.1233 (2) | 0.0322 (4) | |
| C3 | 0.1257 (2) | 0.76095 (10) | 0.1997 (2) | 0.0345 (4) | |
| C4 | 0.4377 (2) | 0.80249 (11) | 0.0832 (2) | 0.0356 (4) | |
| C5 | 0.4889 (2) | 0.96704 (10) | 0.5512 (2) | 0.0336 (4) | |
| C6 | 0.1543 (2) | 0.68852 (11) | 0.1592 (2) | 0.0408 (5) | |
| C7 | 0.0076 (2) | 0.77466 (13) | 0.2539 (3) | 0.0445 (5) | |
| H7 | −0.0116 | 0.8225 | 0.2831 | 0.053* | |
| C8 | 0.0644 (3) | 0.62731 (13) | 0.1659 (3) | 0.0615 (7) | |
| H8 | 0.0825 | 0.5792 | 0.1372 | 0.074* | |
| C9 | 0.5322 (3) | 0.77105 (13) | 0.0185 (3) | 0.0480 (5) | |
| H9 | 0.5331 | 0.7205 | −0.0067 | 0.058* | |
| C10 | −0.0793 (3) | 0.71361 (15) | 0.2620 (3) | 0.0602 (7) | |
| H10 | −0.1583 | 0.7206 | 0.2986 | 0.072* | |
| C11 | −0.0529 (3) | 0.64235 (16) | 0.2177 (4) | 0.0697 (8) | |
| H11 | −0.1164 | 0.6033 | 0.2230 | 0.084* | |
| C12 | 0.5678 (3) | 0.90352 (14) | 0.0683 (3) | 0.0537 (6) | |
| H12 | 0.5982 | 0.9535 | 0.0791 | 0.064* |
| Mn1 | 0.02973 (17) | 0.02287 (16) | 0.03696 (18) | −0.00105 (10) | 0.00938 (13) | −0.00085 (10) |
| S1 | 0.0522 (4) | 0.0722 (4) | 0.0788 (4) | 0.0189 (3) | 0.0429 (3) | 0.0219 (3) |
| O1 | 0.0519 (9) | 0.0291 (7) | 0.0401 (7) | −0.0171 (6) | 0.0090 (6) | 0.0016 (6) |
| O2 | 0.0616 (9) | 0.0343 (8) | 0.0363 (8) | −0.0179 (7) | 0.0058 (7) | 0.0050 (6) |
| O3 | 0.0294 (7) | 0.0425 (8) | 0.0417 (7) | 0.0018 (6) | 0.0150 (6) | 0.0054 (6) |
| O4 | 0.0372 (7) | 0.0387 (7) | 0.0376 (7) | 0.0065 (6) | 0.0152 (6) | 0.0074 (6) |
| N1 | 0.0368 (9) | 0.0326 (9) | 0.0584 (11) | 0.0025 (7) | 0.0230 (8) | 0.0052 (8) |
| N2 | 0.0325 (8) | 0.0247 (8) | 0.0367 (8) | −0.0019 (6) | 0.0115 (6) | −0.0021 (6) |
| N3 | 0.0472 (10) | 0.0238 (8) | 0.0445 (9) | 0.0038 (7) | 0.0144 (8) | −0.0033 (7) |
| C1 | 0.0323 (10) | 0.0224 (8) | 0.0359 (10) | −0.0023 (7) | 0.0130 (8) | −0.0040 (7) |
| C2 | 0.0340 (10) | 0.0263 (9) | 0.0327 (9) | 0.0030 (7) | 0.0095 (8) | −0.0013 (7) |
| C3 | 0.0330 (10) | 0.0316 (10) | 0.0335 (9) | −0.0042 (8) | 0.0074 (8) | 0.0026 (7) |
| C4 | 0.0340 (10) | 0.0345 (10) | 0.0357 (10) | 0.0069 (8) | 0.0112 (8) | 0.0025 (8) |
| C5 | 0.0364 (10) | 0.0219 (9) | 0.0385 (10) | −0.0045 (7) | 0.0106 (8) | 0.0016 (8) |
| C6 | 0.0419 (11) | 0.0293 (10) | 0.0425 (11) | −0.0030 (8) | 0.0077 (9) | 0.0046 (8) |
| C7 | 0.0372 (11) | 0.0505 (13) | 0.0446 (11) | 0.0007 (9) | 0.0149 (9) | 0.0096 (9) |
| C8 | 0.0638 (16) | 0.0319 (12) | 0.0713 (16) | −0.0098 (11) | 0.0086 (13) | 0.0109 (11) |
| C9 | 0.0470 (12) | 0.0478 (13) | 0.0505 (12) | 0.0133 (10) | 0.0208 (10) | 0.0022 (10) |
| C10 | 0.0439 (13) | 0.0677 (17) | 0.0672 (15) | −0.0024 (12) | 0.0203 (11) | 0.0300 (13) |
| C11 | 0.0503 (15) | 0.0589 (17) | 0.0879 (19) | −0.0153 (12) | 0.0149 (14) | 0.0341 (14) |
| C12 | 0.0404 (12) | 0.0462 (12) | 0.0781 (16) | 0.0069 (10) | 0.0276 (11) | 0.0182 (12) |
| Mn1—O1 | 2.2146 (15) | C1—O4ii | 1.251 (2) |
| Mn1—O2 | 2.2100 (14) | C1—C1ii | 1.556 (4) |
| Mn1—O3 | 2.1640 (14) | C2—C4 | 1.453 (3) |
| Mn1—O4 | 2.1667 (15) | C3—C6 | 1.396 (3) |
| Mn1—N1 | 2.3170 (17) | C3—C7 | 1.396 (3) |
| Mn1—N2 | 2.2279 (16) | C4—C9 | 1.357 (3) |
| S1—C12 | 1.694 (3) | C5—O2i | 1.235 (2) |
| S1—C9 | 1.702 (2) | C5—C5i | 1.553 (3) |
| O1—C5 | 1.260 (2) | C6—C8 | 1.395 (3) |
| O2—C5i | 1.235 (2) | C7—C10 | 1.378 (3) |
| O3—C1 | 1.254 (2) | C7—H7 | 0.9300 |
| O4—C1ii | 1.251 (2) | C8—C11 | 1.378 (4) |
| N1—C12 | 1.308 (3) | C8—H8 | 0.9300 |
| N1—C4 | 1.384 (3) | C9—H9 | 0.9300 |
| N2—C2 | 1.323 (2) | C10—C11 | 1.382 (4) |
| N2—C3 | 1.389 (2) | C10—H10 | 0.9300 |
| N3—C2 | 1.353 (2) | C11—H11 | 0.9300 |
| N3—C6 | 1.384 (3) | C12—H12 | 0.9300 |
| N3—H3 | 0.8600 | ||
| O3—Mn1—O4 | 76.57 (5) | N2—C2—C4 | 120.73 (16) |
| O3—Mn1—O2 | 85.83 (5) | N3—C2—C4 | 126.47 (17) |
| O4—Mn1—O2 | 110.56 (6) | N2—C3—C6 | 109.46 (17) |
| O3—Mn1—O1 | 155.34 (5) | N2—C3—C7 | 129.70 (18) |
| O4—Mn1—O1 | 96.90 (5) | C6—C3—C7 | 120.84 (19) |
| O2—Mn1—O1 | 74.11 (5) | C9—C4—N1 | 114.63 (19) |
| O3—Mn1—N2 | 114.83 (5) | C9—C4—C2 | 130.04 (19) |
| O4—Mn1—N2 | 90.45 (6) | N1—C4—C2 | 115.32 (16) |
| O2—Mn1—N2 | 153.97 (6) | O2i—C5—O1 | 127.00 (17) |
| O1—Mn1—N2 | 88.68 (5) | O2i—C5—C5i | 117.4 (2) |
| O3—Mn1—N1 | 91.44 (6) | O1—C5—C5i | 115.6 (2) |
| O4—Mn1—N1 | 154.07 (6) | N3—C6—C8 | 132.4 (2) |
| O2—Mn1—N1 | 91.04 (6) | N3—C6—C3 | 105.50 (16) |
| O1—Mn1—N1 | 102.91 (6) | C8—C6—C3 | 122.1 (2) |
| N2—Mn1—N1 | 73.63 (6) | C10—C7—C3 | 116.5 (2) |
| C12—S1—C9 | 90.09 (11) | C10—C7—H7 | 121.7 |
| C5—O1—Mn1 | 116.44 (11) | C3—C7—H7 | 121.7 |
| C5i—O2—Mn1 | 116.44 (12) | C11—C8—C6 | 116.0 (2) |
| C1—O3—Mn1 | 114.82 (12) | C11—C8—H8 | 122.0 |
| C1ii—O4—Mn1 | 114.64 (12) | C6—C8—H8 | 122.0 |
| C12—N1—C4 | 110.24 (18) | C4—C9—S1 | 110.03 (17) |
| C12—N1—Mn1 | 135.57 (15) | C4—C9—H9 | 125.0 |
| C4—N1—Mn1 | 113.89 (12) | S1—C9—H9 | 125.0 |
| C2—N2—C3 | 105.18 (15) | C7—C10—C11 | 122.3 (2) |
| C2—N2—Mn1 | 116.34 (12) | C7—C10—H10 | 118.8 |
| C3—N2—Mn1 | 138.48 (13) | C11—C10—H10 | 118.8 |
| C2—N3—C6 | 107.05 (16) | C8—C11—C10 | 122.2 (2) |
| C2—N3—H3 | 126.5 | C8—C11—H11 | 118.9 |
| C6—N3—H3 | 126.5 | C10—C11—H11 | 118.9 |
| O4ii—C1—O3 | 126.52 (17) | N1—C12—S1 | 115.01 (18) |
| O4ii—C1—C1ii | 116.9 (2) | N1—C12—H12 | 122.5 |
| O3—C1—C1ii | 116.54 (19) | S1—C12—H12 | 122.5 |
| N2—C2—N3 | 112.80 (17) |
| H··· | ||||
| N3—H3···O1iii | 0.86 | 1.96 | 2.812 (2) | 170 |
| C12—H12···O3iv | 0.93 | 2.52 | 3.137 (3) | 124 |
Selected bond lengths (Å)
| Mn1—O1 | 2.2146 (15) |
| Mn1—O2 | 2.2100 (14) |
| Mn1—O3 | 2.1640 (14) |
| Mn1—O4 | 2.1667 (15) |
| Mn1—N1 | 2.3170 (17) |
| Mn1—N2 | 2.2279 (16) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N3—H3⋯O1i | 0.86 | 1.96 | 2.812 (2) | 170 |
| C12—H12⋯O3ii | 0.93 | 2.52 | 3.137 (3) | 124 |
Symmetry codes: (i) ; (ii) .