Literature DB >> 24426126

Expression, Purification and Characterization of the Proline Dehydrogenase Domain of PutA from Pseudomonas putida POS-F84.

Eskandar Omidinia1, Rahman Mahdizadehdehosta2, Hamid Shahbaz Mohammadi1.   

Abstract

The objective of the present work was to express a truncated form of Pseudomonas putida PutA that shows proline dehydrogenase (ProDH) activity. The putA gene encoding ProDH enzyme was cloned into pET23a vector and expressed in Escherichia coli strain BL-21 (DE3) plysS. The recombinant P. putida enzyme was biochemically characterized and its three dimensional structure was also predicted. ProDH encoding sequence showed an open reading frame of 1,035-bp encoding a 345 amino acid residues polypeptide chain. Purified His-tagged enzyme gave a single band with a molecular mass of 40 kDa on SDS-PAGE. The molecular mass of the isolated enzyme was found to be about 40 kDa by gel filtration. This suggested that the enzyme of interest consists of one subunit. The K m and V max values of recombinant P. putida ProDH were estimated to be 31 mM and 132 μmol/min, respectively. The optimum pH and temperature for the catalytic activity of the enzyme was about pH 8.5 and 30 °C. The modeling analysis of the three dimensional structure elucidated that Ser-165, Lys-195 and Ala-252 were key residues for the ProDH activity. This study provides data on the cloning, sequencing and recombinant expression of PutA ProDH domain from P. putida POS-F84.

Entities:  

Keywords:  Characterization; Expression; Proline dehydrogenase (ProDH); Pseudomonas putida

Year:  2013        PMID: 24426126      PMCID: PMC3689398          DOI: 10.1007/s12088-013-0375-2

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN: 0046-8991            Impact factor:   2.461


  13 in total

1.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

2.  Proline catabolism by Pseudomonas putida: cloning, characterization, and expression of the put genes in the presence of root exudates.

Authors:  S Vílchez; L Molina; C Ramos; J L Ramos
Journal:  J Bacteriol       Date:  2000-01       Impact factor: 3.490

3.  Enzymatic properties of the purified putA protein from Salmonella typhimurium.

Authors:  R Menzel; J Roth
Journal:  J Biol Chem       Date:  1981-09-25       Impact factor: 5.157

4.  Redox properties of the PutA protein from Escherichia coli and the influence of the flavin redox state on PutA-DNA interactions.

Authors:  D F Becker; E A Thomas
Journal:  Biochemistry       Date:  2001-04-17       Impact factor: 3.162

5.  Probing a hydrogen bond pair and the FAD redox properties in the proline dehydrogenase domain of Escherichia coli PutA.

Authors:  Berevan A Baban; Madhavan P Vinod; John J Tanner; Donald F Becker
Journal:  Biochim Biophys Acta       Date:  2004-09-01

6.  Isolation, DNA sequence analysis, and mutagenesis of a proline dehydrogenase gene (putA) from Bradyrhizobium japonicum.

Authors:  P F Straub; P H Reynolds; S Althomsons; V Mett; Y Zhu; G Shearer; D H Kohl
Journal:  Appl Environ Microbiol       Date:  1996-01       Impact factor: 4.792

7.  Structure of the proline dehydrogenase domain of the multifunctional PutA flavoprotein.

Authors:  Yong-Hwan Lee; Shorena Nadaraia; Dan Gu; Donald F Becker; John J Tanner
Journal:  Nat Struct Biol       Date:  2003-02

8.  Purification and properties of the bifunctional proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase from Pseudomonas aeruginosa.

Authors:  L Meile; T Leisinger
Journal:  Eur J Biochem       Date:  1982-12

9.  Characterization of the Vibrio vulnificus putAP operon, encoding proline dehydrogenase and proline permease, and its differential expression in response to osmotic stress.

Authors:  Jeong Hyun Lee; Na Young Park; Myung Hee Lee; Sang Ho Choi
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

10.  Proline dehydrogenase from Pseudomonas fluorescence: gene cloning, purification, characterization and homology modeling.

Authors:  H Shahbaz Mohammadi; E Omidinia
Journal:  Prikl Biokhim Mikrobiol       Date:  2012 Mar-Apr
View more
  1 in total

1.  Recombinant expression and biophysical characterization of Mrt4 protein that involved in mRNA turnover and ribosome assembly from Saccharomyces cerevisiae.

Authors:  Mohd Kashif; Mohd Asalam; Saad S Al Shehri; Bhupendra Kumar; Neha Singh; Md Sohail Akhtar
Journal:  Bioengineered       Date:  2022-04       Impact factor: 6.832

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.