Literature DB >> 24419618

Cloning, purification, crystallization and preliminary X-ray studies of HMO2 from Saccharomyces cerevisiae.

Zhen Guo1, Shaocheng Zhang1, Hongpeng Zhang1, Li Jin1, Shasha Zhao1, Wei Yang1, Jian Tang1, Deqiang Wang1.   

Abstract

The high-mobility group protein (HMO2) of Saccharomyces cerevisiae is a component of the chromatin-remodelling complex INO80, which is involved in double-strand break (DSB) repair. HMO2 can also bind DNA to protect it from exonucleolytic cleavage. Nevertheless, little structural information is available regarding these functions of HMO2. Since determination of three-dimensional structure is a powerful means to facilitate functional characterization, X-ray crystallography has been used to accomplish this task. Here, the expression, purification, crystallization and preliminary crystallographic analysis of HMO2 from S. cerevisiae are reported. The crystal belonged to space group P222, with unit-cell parameters a = 39.35, b = 75.69, c = 108.03 Å, and diffracted to a resolution of 3.0 Å. The crystals are most likely to contain one molecule in the asymmetric unit, with a VM value of 3.19 Å(3) Da(-1).

Entities:  

Keywords:  HMO2; Saccharomyces cerevisiae

Mesh:

Substances:

Year:  2013        PMID: 24419618      PMCID: PMC3943102          DOI: 10.1107/S2053230X13031580

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  27 in total

1.  Revised nomenclature for high mobility group (HMG) chromosomal proteins.

Authors:  M Bustin
Journal:  Trends Biochem Sci       Date:  2001-03       Impact factor: 13.807

Review 2.  HMG1 and 2: architectural DNA-binding proteins.

Authors:  J O Thomas
Journal:  Biochem Soc Trans       Date:  2001-08       Impact factor: 5.407

3.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

4.  Characterization of a high mobility group 1/2 homolog in yeast.

Authors:  J Lu; R Kobayashi; S J Brill
Journal:  J Biol Chem       Date:  1996-12-27       Impact factor: 5.157

5.  The structure of a chromosomal high mobility group protein-DNA complex reveals sequence-neutral mechanisms important for non-sequence-specific DNA recognition.

Authors:  F V Murphy; R M Sweet; M E Churchill
Journal:  EMBO J       Date:  1999-12-01       Impact factor: 11.598

6.  Structural analysis of HMGD-DNA complexes reveals influence of intercalation on sequence selectivity and DNA bending.

Authors:  Mair E A Churchill; Janet Klass; David L Zoetewey
Journal:  J Mol Biol       Date:  2010-08-25       Impact factor: 5.469

7.  iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM.

Authors:  T Geoff G Battye; Luke Kontogiannis; Owen Johnson; Harold R Powell; Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

8.  Distinct roles for SWR1 and INO80 chromatin remodeling complexes at chromosomal double-strand breaks.

Authors:  Haico van Attikum; Olivier Fritsch; Susan M Gasser
Journal:  EMBO J       Date:  2007-08-30       Impact factor: 11.598

9.  Actively transcribed rRNA genes in S. cerevisiae are organized in a specialized chromatin associated with the high-mobility group protein Hmo1 and are largely devoid of histone molecules.

Authors:  Katharina Merz; Maria Hondele; Hannah Goetze; Katharina Gmelch; Ulrike Stoeckl; Joachim Griesenbeck
Journal:  Genes Dev       Date:  2008-05-01       Impact factor: 11.361

10.  The yeast high mobility group protein HMO2, a subunit of the chromatin-remodeling complex INO80, binds DNA ends.

Authors:  Sreerupa Ray; Anne Grove
Journal:  Nucleic Acids Res       Date:  2009-09-02       Impact factor: 16.971

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