Literature DB >> 24418890

Screening of small molecules affecting mammalian P-body assembly uncovers links with diverse intracellular processes and organelle physiology.

Javier P Martínez1, Gemma Pérez-Vilaró2, Yazh Muthukumar3, Nicoletta Scheller2, Tatjana Hirsch3, Randi Diestel3, Heinrich Steinmetz4, Rolf Jansen4, Ronald Frank3, Florenz Sasse3, Andreas Meyerhans5, Juana Díez2.   

Abstract

Processing bodies (P-bodies) are cytoplasmatic mRNP granules containing non-translating mRNAs and proteins from the mRNA decay and silencing machineries. The mechanism of P-body assembly has been typically addressed by depleting P-body components. Here we apply a complementary approach and establish an automated cell-based assay platform to screen for molecules affecting P-body assembly. From a unique library of compounds derived from myxobacteria, 30 specifically inhibited P-body assembly. Gephyronic acid A (GA), a eukaryotic protein synthesis inhibitor, showed the strongest effect. GA also inhibited, under stress conditions, phosphorylation of eIF2α and stress granule formation. Other hits uncovered interesting novel links between P-body assembly, lipid metabolism, and internal organelle physiology. The obtained results provide a chemical toolbox to manipulate P-body assembly and function.

Entities:  

Keywords:  P-body assembly; eIF2α; gephyronic acid A; inhibitors; myxobacterial metabolites; processing bodies; stress granules

Mesh:

Substances:

Year:  2013        PMID: 24418890      PMCID: PMC3907476          DOI: 10.4161/rna.26851

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  49 in total

Review 1.  Acetyl-coenzyme A carboxylase: crucial metabolic enzyme and attractive target for drug discovery.

Authors:  L Tong
Journal:  Cell Mol Life Sci       Date:  2005-08       Impact factor: 9.261

2.  A mechanism for the potent inhibition of eukaryotic acetyl-coenzyme A carboxylase by soraphen A, a macrocyclic polyketide natural product.

Authors:  Yang Shen; Sandra L Volrath; Stephanie C Weatherly; Tedd D Elich; Liang Tong
Journal:  Mol Cell       Date:  2004-12-22       Impact factor: 17.970

3.  A role for eIF4E and eIF4E-transporter in targeting mRNPs to mammalian processing bodies.

Authors:  Maria Alexandra Andrei; Dierk Ingelfinger; Rainer Heintzmann; Tilmann Achsel; Rolando Rivera-Pomar; Reinhard Lührmann
Journal:  RNA       Date:  2005-05       Impact factor: 4.942

4.  Archazolids, new cytotoxic macrolactones from Archangium gephyra (Myxobacteria). Production, isolation, physico-chemical and biological properties.

Authors:  Florenz Sasse; Heinrich Steinmetz; Gerhard Höfle; Hans Reichenbach
Journal:  J Antibiot (Tokyo)       Date:  2003-06       Impact factor: 2.649

5.  In vitro cultivation of human tumors: establishment of cell lines derived from a series of solid tumors.

Authors:  D J Giard; S A Aaronson; G J Todaro; P Arnstein; J H Kersey; H Dosik; W P Parks
Journal:  J Natl Cancer Inst       Date:  1973-11       Impact factor: 13.506

6.  Gephyronic acid, a novel inhibitor of eukaryotic protein synthesis from Archangium gephyra (myxobacteria). Production, isolation, physico-chemical and biological properties, and mechanism of action.

Authors:  F Sasse; H Steinmetz; G Höfle; H Reichenbach
Journal:  J Antibiot (Tokyo)       Date:  1995-01       Impact factor: 2.649

7.  Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function.

Authors:  J Ross Buchan; Regina-Maria Kolaitis; J Paul Taylor; Roy Parker
Journal:  Cell       Date:  2013-06-20       Impact factor: 41.582

8.  Archazolid and apicularen: novel specific V-ATPase inhibitors.

Authors:  Markus Huss; Florenz Sasse; Brigitte Kunze; Rolf Jansen; Heinrich Steinmetz; Gudrun Ingenhorst; Axel Zeeck; Helmut Wieczorek
Journal:  BMC Biochem       Date:  2005-08-04       Impact factor: 4.059

9.  RNA-binding proteins TIA-1 and TIAR link the phosphorylation of eIF-2 alpha to the assembly of mammalian stress granules.

Authors:  N L Kedersha; M Gupta; W Li; I Miller; P Anderson
Journal:  J Cell Biol       Date:  1999-12-27       Impact factor: 10.539

10.  Stress granules and processing bodies are dynamically linked sites of mRNP remodeling.

Authors:  Nancy Kedersha; Georg Stoecklin; Maranatha Ayodele; Patrick Yacono; Jens Lykke-Andersen; Marvin J Fritzler; Donalyn Scheuner; Randal J Kaufman; David E Golan; Paul Anderson
Journal:  J Cell Biol       Date:  2005-06-20       Impact factor: 10.539

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  1 in total

1.  Coordinated repression of pro-differentiation genes via P-bodies and transcription maintains Drosophila intestinal stem cell identity.

Authors:  Kasun Buddika; Yi-Ting Huang; Ishara S Ariyapala; Alex Butrum-Griffith; Sam A Norrell; Alex M O'Connor; Viraj K Patel; Samuel A Rector; Mark Slovan; Mallory Sokolowski; Yasuko Kato; Akira Nakamura; Nicholas S Sokol
Journal:  Curr Biol       Date:  2021-12-06       Impact factor: 10.834

  1 in total

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