Literature DB >> 24415796

Fluid-structure interaction involving large deformations: 3D simulations and applications to biological systems.

Fang-Bao Tian1, Hu Dai1, Haoxiang Luo1, James F Doyle2, Bernard Rousseau3.   

Abstract

Three-dimensional fluid-structure interaction (FSI) involving large deformations of flexible bodies is common in biological systems, but accurate and efficient numerical approaches for modeling such systems are still scarce. In this work, we report a successful case of combining an existing immersed-boundary flow solver with a nonlinear finite-element solid-mechanics solver specifically for three-dimensional FSI simulations. This method represents a significant enhancement from the similar methods that are previously available. Based on the Cartesian grid, the viscous incompressible flow solver can handle boundaries of large displacements with simple mesh generation. The solid-mechanics solver has separate subroutines for analyzing general three-dimensional bodies and thin-walled structures composed of frames, membranes, and plates. Both geometric nonlinearity associated with large displacements and material nonlinearity associated with large strains are incorporated in the solver. The FSI is achieved through a strong coupling and partitioned approach. We perform several validation cases, and the results may be used to expand the currently limited database of FSI benchmark study. Finally, we demonstrate the versatility of the present method by applying it to the aerodynamics of elastic wings of insects and the flow-induced vocal fold vibration.

Entities:  

Keywords:  Fluid-structure interaction; biological flows; finite-element method; immersed-boundary method; insect flight; large deformations; vocal fold

Year:  2014        PMID: 24415796      PMCID: PMC3884079          DOI: 10.1016/j.jcp.2013.10.047

Source DB:  PubMed          Journal:  J Comput Phys        ISSN: 0021-9991            Impact factor:   3.553


  10 in total

1.  A finite-element model of vocal-fold vibration.

Authors:  F Alipour; D A Berry; I R Titze
Journal:  J Acoust Soc Am       Date:  2000-12       Impact factor: 1.840

2.  A coupled sharp-interface immersed boundary-finite-element method for flow-structure interaction with application to human phonation.

Authors:  X Zheng; Q Xue; R Mittal; S Beilamowicz
Journal:  J Biomech Eng       Date:  2010-11       Impact factor: 2.097

3.  A two-dimensional biomechanical model of vocal fold posturing.

Authors:  Ingo R Titze; Eric J Hunter
Journal:  J Acoust Soc Am       Date:  2007-04       Impact factor: 1.840

4.  A Numerical Method for Solving the 3D Unsteady Incompressible Navier-Stokes Equations in Curvilinear Domains with Complex Immersed Boundaries.

Authors:  Liang Ge; Fotis Sotiropoulos
Journal:  J Comput Phys       Date:  2007-08       Impact factor: 3.553

5.  Analysis of flow-structure interaction in the larynx during phonation using an immersed-boundary method.

Authors:  Haoxiang Luo; Rajat Mittal; Steven A Bielamowicz
Journal:  J Acoust Soc Am       Date:  2009-08       Impact factor: 1.840

6.  A VERSATILE SHARP INTERFACE IMMERSED BOUNDARY METHOD FOR INCOMPRESSIBLE FLOWS WITH COMPLEX BOUNDARIES.

Authors:  R Mittal; H Dong; M Bozkurttas; F M Najjar; A Vargas; A von Loebbecke
Journal:  J Comput Phys       Date:  2008       Impact factor: 3.553

7.  Vibratory responses of synthetic, self-oscillating vocal fold models.

Authors:  Preston R Murray; Scott L Thomson
Journal:  J Acoust Soc Am       Date:  2012-11       Impact factor: 1.840

8.  A Sharp-Interface Immersed Boundary Method with Improved Mass Conservation and Reduced Spurious Pressure Oscillations.

Authors:  Jung Hee Seo; Rajat Mittal
Journal:  J Comput Phys       Date:  2011-08-10       Impact factor: 3.553

9.  An immersed-boundary method for flow-structure interaction in biological systems with application to phonation.

Authors:  Haoxiang Luo; Rajat Mittal; Xudong Zheng; Steven A Bielamowicz; Raymond J Walsh; James K Hahn
Journal:  J Comput Phys       Date:  2008-11-20       Impact factor: 3.553

10.  Toward a simulation-based tool for the treatment of vocal fold paralysis.

Authors:  Rajat Mittal; Xudong Zheng; Rajneesh Bhardwaj; Jung Hee Seo; Qian Xue; Steven Bielamowicz
Journal:  Front Physiol       Date:  2011-05-02       Impact factor: 4.566

  10 in total
  10 in total

1.  Effect of resection depth of early glottic cancer on vocal outcome: an optimized finite element simulation.

Authors:  Ted Mau; Anil Palaparthi; Tobias Riede; Ingo R Titze
Journal:  Laryngoscope       Date:  2015-05-22       Impact factor: 3.325

2.  Subject-Specific Computational Modeling of Evoked Rabbit Phonation.

Authors:  Siyuan Chang; Carolyn K Novaleski; Tsuyoshi Kojima; Masanobu Mizuta; Haoxiang Luo; Bernard Rousseau
Journal:  J Biomech Eng       Date:  2016-01       Impact factor: 2.097

3.  A reduced-order flow model for vocal fold vibration: from idealized to subject-specific models.

Authors:  Ye Chen; Zheng Li; Siyuan Chang; Bernard Rousseau; Haoxiang Luo
Journal:  J Fluids Struct       Date:  2020-02-25       Impact factor: 2.917

4.  A Formulation for Fluid Structure-Interactions in FEBio Using Mixture Theory.

Authors:  Jay J Shim; Steve A Maas; Jeffrey A Weiss; Gerard A Ateshian
Journal:  J Biomech Eng       Date:  2019-03-05       Impact factor: 2.097

5.  A one-dimensional flow model enhanced by machine learning for simulation of vocal fold vibration.

Authors:  Zheng Li; Ye Chen; Siyuan Chang; Bernard Rousseau; Haoxiang Luo
Journal:  J Acoust Soc Am       Date:  2021-03       Impact factor: 1.840

6.  A computational study on the influence of insect wing geometry on bee flight mechanics.

Authors:  Jeffrey Feaster; Francine Battaglia; Javid Bayandor
Journal:  Biol Open       Date:  2017-12-15       Impact factor: 2.422

7.  Numerical Simulations of the Motion and Deformation of Three RBCs during Poiseuille Flow through a Constricted Vessel Using IB-LBM.

Authors:  Rongyang Wang; Yikun Wei; Chuanyu Wu; Liang Sun; Wenguang Zheng
Journal:  Comput Math Methods Med       Date:  2018-02-21       Impact factor: 2.238

8.  Subject-Specific Computational Fluid-Structure Interaction Modeling of Rabbit Vocal Fold Vibration.

Authors:  Amit Avhad; Zheng Li; Azure Wilson; Lea Sayce; Siyuan Chang; Bernard Rousseau; Haoxiang Luo
Journal:  Fluids (Basel)       Date:  2022-03-06

9.  Aortic Leaflet Stresses Are Substantially Lower Using Pulmonary Visceral Pleura Than Pericardial Tissue.

Authors:  Ye Chen; Xiao Lu; Haoxiang Luo; Ghassan S Kassab
Journal:  Front Bioeng Biotechnol       Date:  2022-04-26

10.  In vivo quantification of mechanical properties of caudal fins in adult zebrafish.

Authors:  Sahil Puri; Tinri Aegerter-Wilmsen; Anna Jaźwińska; Christof M Aegerter
Journal:  J Exp Biol       Date:  2018-02-20       Impact factor: 3.312

  10 in total

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