Literature DB >> 24415701

[Rearrangement of mitochondrial genome in fishes].

Li Gong1, Wei Shi, Li-Zhen Si, Xiao-Yu Kong.   

Abstract

Generally, the mitochondrial genome is characterized by the property of highly conserved organization. After comparing the 1,255 fish complete mitogenome sequences deposited in GenBank (as of Nov. 3, 2013), approximately 52 complete mitogenomes are found to have been rearranged. Of these species, three types of rearrangement-shuffling, translocation, and inversion-have been found. Further analysis shows that the sites of the rearrangements occur frequently in WANCY cluster, IQM cluster, ND6 gene, control region (D-loop) and its adjacent genes. Based on the four models that explain the gene rearrangements commonly adopted by scientists, we attempted to infer the possible mechanisms for the three types of gene rearrangement as well as the application of gene rearrangement in phylogenetic studies.

Entities:  

Keywords:  Gene rearrangement; Inversion; Phylogenesis; Shuffling; Translocation; tDNA

Mesh:

Year:  2013        PMID: 24415701

Source DB:  PubMed          Journal:  Dongwuxue Yanjiu        ISSN: 0254-5853


  4 in total

1.  Novel Gene Rearrangement in the Mitochondrial Genome of Three Garra and Insights Into the Phylogenetic Relationships of Labeoninae.

Authors:  Chi Zhang; Kun Zhang; Ying Peng; Jianshe Zhou; Yifan Liu; Bingjian Liu
Journal:  Front Genet       Date:  2022-06-08       Impact factor: 4.772

2.  The complete mitochondrial genome of the Mexican blind brotula Typhlias pearsei (Ophidiiformes: Dinematichthydae): an endemic and troglomorphic cavefish from the Yucatán Peninsula karst aquifer.

Authors:  Jairo Arroyave; Adán Fernando Mar-Silva; Píndaro Díaz-Jaimes
Journal:  Mitochondrial DNA B Resour       Date:  2022-06-24       Impact factor: 0.610

3.  Tandem Duplication and Random Loss for mitogenome rearrangement in Symphurus (Teleost: Pleuronectiformes).

Authors:  Wei Shi; Li Gong; Shu-Ying Wang; Xian-Guang Miao; Xiao-Yu Kong
Journal:  BMC Genomics       Date:  2015-05-06       Impact factor: 3.969

4.  Comparative genomic analysis of vertebrate mitochondrial reveals a differential of rearrangements rate between taxonomic class.

Authors:  Paula Montaña-Lozano; Manuela Moreno-Carmona; Mauricio Ochoa-Capera; Natalia S Medina; Jeffrey L Boore; Carlos F Prada
Journal:  Sci Rep       Date:  2022-03-31       Impact factor: 4.379

  4 in total

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