Literature DB >> 24414797

Photometric method for routine determination of kcat and carbamylation of rubisco.

T D Sharkey1, L V Savitch, N D Butz.   

Abstract

Ribulose bisphosphate carboxylase (rubisco) is the first enzyme in photosynthetic CO2 assimilation. It is also the single largest sink for nitrogen in plants. Several parameters of rubisco activity are often measured including initial activity upon extraction, degree of carbamylation, catalytic constant of the enzyme (kcat), and the total amount of enzyme present in a leaf. We report here improvements of the photometric assay of rubisco in which rubisco activity is coupled to NADH oxidation which is continuously monitored in a photometer. The initial lag usually found in this assay was eliminated by assaying rubisco activity at pH 8.0 instead of 8.2, using a large amount of phosphoglycerate kinase, and adding monovalent cations to the assay buffer. We found that when using the photometric assay, the ratio of activity found initially upon extraction divided by the activity after incubating with CO2 and Mg(2+) reflects the degree of carbamylation as determined by (14)carboxyarabinitol bisphosphate/(12)carboxyarabinitol bisphosphate competition. We developed methods for measuring the catalytic constant of rubisco as well as the total amount of enzyme present using the photometric assay and carboxyarabinitol 1,5-bisphosphate. We believe that the photometric assay for activity will prove more useful than the (14)CO2 assay in many studies.

Entities:  

Year:  1991        PMID: 24414797     DOI: 10.1007/BF00027175

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  14 in total

1.  A comparison between the coupled spectrophotometric and uncoupled radiometric assays for RuBP carboxylase.

Authors:  D A Ward; A J Keys
Journal:  Photosynth Res       Date:  1989-11       Impact factor: 3.573

2.  An improved spectrophotometric assay for ribulosebisphosphate carboxylase.

Authors:  R M Lilley; D A Walker
Journal:  Biochim Biophys Acta       Date:  1974-07-17

3.  Regulation of Ribulose-1,5-Bisphosphate Carboxylase Activity in Response to Changing Partial Pressure of O(2) and Light in Phaseolus vulgaris.

Authors:  T D Sharkey; J R Seemann; J A Berry
Journal:  Plant Physiol       Date:  1986-07       Impact factor: 8.340

4.  Evidence that Ribulose 1,5-Bisphosphate (RuBP) Binds to Inactive Sites of RuBP Carboxylase in Vivo and an Estimate of the Rate Constant for Dissociation.

Authors:  Z G Cardon; K A Mott
Journal:  Plant Physiol       Date:  1989-04       Impact factor: 8.340

Review 5.  Ribulose-1,5-bisphosphate carboxylase-oxygenase.

Authors:  H M Miziorko; G H Lorimer
Journal:  Annu Rev Biochem       Date:  1983       Impact factor: 23.643

6.  A Kinetic Characterization of Slow Inactivation of Ribulosebisphosphate Carboxylase during Catalysis.

Authors:  D L Edmondson; M R Badger; T J Andrews
Journal:  Plant Physiol       Date:  1990-08       Impact factor: 8.340

7.  A gas-exchange study of photosynthesis and isoprene emission inQuercus rubra L.

Authors:  F Loreto; T D Sharkey
Journal:  Planta       Date:  1990-11       Impact factor: 4.116

8.  Metabolism of 2-carboxyarabinitol 1-phosphate and regulation of ribulose-1,5-bisphosphate carboxylase activity.

Authors:  J R Seemann; J Kobza; B D Moore
Journal:  Photosynth Res       Date:  1990-02       Impact factor: 3.573

9.  Effect of temperature on the CO2/O 2 specificity of ribulose-1,5-bisphosphate carboxylase/oxygenase and the rate of respiration in the light : Estimates from gas-exchange measurements on spinach.

Authors:  A Brooks; G D Farquhar
Journal:  Planta       Date:  1985-08       Impact factor: 4.116

10.  Some relationships between the biochemistry of photosynthesis and the gas exchange of leaves.

Authors:  S von Caemmerer; G D Farquhar
Journal:  Planta       Date:  1981-12       Impact factor: 4.116

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  27 in total

1.  Photosynthetic responses to variable light: a comparison of species from contrasting habitats.

Authors:  Erling Ögren; Ulrika Sundin
Journal:  Oecologia       Date:  1996-04       Impact factor: 3.225

2.  Hydrogen peroxide functions as a secondary messenger for brassinosteroids-induced CO2 assimilation and carbohydrate metabolism in Cucumis sativus.

Authors:  Yu-ping Jiang; Fei Cheng; Yan-hong Zhou; Xiao-jian Xia; Wei-hua Mao; Kai Shi; Zhi-xiang Chen; Jing-quan Yu
Journal:  J Zhejiang Univ Sci B       Date:  2012-10       Impact factor: 3.066

3.  Effects of elevated carbon dioxide on gas exchange and photochemical and nonphotochemical quenching at low temperature in tobacco plants varying in Rubisco activity.

Authors:  Jeffrey Melkonian; David W Wolfe; Thomas G Owens
Journal:  Photosynth Res       Date:  2005       Impact factor: 3.573

4.  Expression of an Escherichia coli phosphoglucomutase in potato (Solanum tuberosum L.) results in minor changes in tuber metabolism and a considerable delay in tuber sprouting.

Authors:  Anna Lytovchenko; Mohammad Hajirezaei; Ira Eickmeier; Volker Mittendorf; Uwe Sonnewald; Lothar Willmitzer; Alisdair R Fernie
Journal:  Planta       Date:  2005-03-16       Impact factor: 4.116

5.  Significant involvement of PEP-CK in carbon assimilation of C4 eudicots.

Authors:  Riyadh Muhaidat; Athena D McKown
Journal:  Ann Bot       Date:  2013-02-06       Impact factor: 4.357

6.  Reduced expression of aconitase results in an enhanced rate of photosynthesis and marked shifts in carbon partitioning in illuminated leaves of wild species tomato.

Authors:  Fernando Carrari; Adriano Nunes-Nesi; Yves Gibon; Anna Lytovchenko; Marcelo Ehlers Loureiro; Alisdair R Fernie
Journal:  Plant Physiol       Date:  2003-10-09       Impact factor: 8.340

7.  Brassinosteroids promote photosynthesis and growth by enhancing activation of Rubisco and expression of photosynthetic genes in Cucumis sativus.

Authors:  Xiao-Jian Xia; Li-Feng Huang; Yan-Hong Zhou; Wei-Hua Mao; Kai Shi; Jian-Xiang Wu; Tadao Asami; Zhixiang Chen; Jing-Quan Yu
Journal:  Planta       Date:  2009-09-17       Impact factor: 4.116

8.  Orchestration of thiamin biosynthesis and central metabolism by combined action of the thiamin pyrophosphate riboswitch and the circadian clock in Arabidopsis.

Authors:  Samuel E Bocobza; Sergey Malitsky; Wagner L Araújo; Adriano Nunes-Nesi; Sagit Meir; Michal Shapira; Alisdair R Fernie; Asaph Aharoni
Journal:  Plant Cell       Date:  2013-01-22       Impact factor: 11.277

9.  A phosphofructokinase B-type carbohydrate kinase family protein, NARA5, for massive expressions of plastid-encoded photosynthetic genes in Arabidopsis.

Authors:  Taro Ogawa; Kenji Nishimura; Takehiko Aoki; Hisabumi Takase; Ken-Ichi Tomizawa; Hiroki Ashida; Akiho Yokota
Journal:  Plant Physiol       Date:  2009-07-08       Impact factor: 8.340

10.  Pleiotropic modulation of carbon and nitrogen metabolism in Arabidopsis plants overexpressing the NAD kinase2 gene.

Authors:  Hideyuki Takahashi; Kentaro Takahara; Shin-nosuke Hashida; Takayuki Hirabayashi; Tamaki Fujimori; Maki Kawai-Yamada; Tomoyuki Yamaya; Shuichi Yanagisawa; Hirofumi Uchimiya
Journal:  Plant Physiol       Date:  2009-07-08       Impact factor: 8.340

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