Literature DB >> 24414432

Two promising alkaline β-glucosidases isolated by functional metagenomics from agricultural soil, including one showing high tolerance towards harsh detergents, oxidants and glucose.

Sophie Biver1, Aurore Stroobants, Daniel Portetelle, Micheline Vandenbol.   

Abstract

New β-glucosidase activities were identified by screening metagenomic libraries constructed with DNA isolated from the topsoil of a winter wheat field. Two of the corresponding proteins, displaying an unusual preference for alkaline conditions, were selected for purification by Ni-NTA chromatography. AS-Esc6, a 762-amino-acid enzyme belonging to glycoside hydrolase family 3, proved to be a mesophilic aryl-β-glucosidase with maximal activity around pH 8 and 40 °C. A similar pH optimum was found for AS-Esc10, a 475-amino-acid GH1-family enzyme, but this enzyme remained significantly active across a wider pH range and was also markedly more stable than AS-Esc6 at pH greater than 10. AS-Esc10 was found to degrade cellobiose and diverse aryl glycosides, with an optimal temperature of 60 °C and good stability up to 50 °C. Unlike AS-Esc6, which showed a classically low inhibitory constant for glucose (14 mM), AS-Esc10 showed enhanced activity in the presence of molar concentrations of glucose. AS-Esc10 was highly tolerant to hydrogen peroxide and also to sodium dodecyl sulfate, this being indicative of kinetic stability. This unique combination of properties makes AS-Esc10 a particularly promising candidate whose potential in biotechnological applications is worth exploring further.

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Year:  2014        PMID: 24414432     DOI: 10.1007/s10295-014-1400-0

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  38 in total

1.  Comparative modeling of the three-dimensional structures of family 3 glycoside hydrolases.

Authors:  A J Harvey; M Hrmova; R De Gori; J N Varghese; G B Fincher
Journal:  Proteins       Date:  2000-11-01

2.  SignalP 4.0: discriminating signal peptides from transmembrane regions.

Authors:  Thomas Nordahl Petersen; Søren Brunak; Gunnar von Heijne; Henrik Nielsen
Journal:  Nat Methods       Date:  2011-09-29       Impact factor: 28.547

3.  Oxidant and SDS-stable alkaline protease from a halo-tolerant Bacillus clausii I-52: enhanced production and simple purification.

Authors:  H-S Joo; C-S Chang
Journal:  J Appl Microbiol       Date:  2005       Impact factor: 3.772

4.  Purification and characterization of a glucose-tolerant beta-glucosidase from Aspergillus niger CCRC 31494.

Authors:  T R Yan; C L Lin
Journal:  Biosci Biotechnol Biochem       Date:  1997-06       Impact factor: 2.043

5.  Characterization of novel β-glucosidases with transglycosylation properties from Trichosporon asahii.

Authors:  Yuxia Wang; Jiming Li; Yan Xu
Journal:  J Agric Food Chem       Date:  2011-09-22       Impact factor: 5.279

6.  Computational analysis of glycoside hydrolase family 1 specificities.

Authors:  Anthony D Hill; Peter J Reilly
Journal:  Biopolymers       Date:  2008-11       Impact factor: 2.505

7.  Structural basis of protein kinetic stability: resistance to sodium dodecyl sulfate suggests a central role for rigidity and a bias toward beta-sheet structure.

Authors:  Marta Manning; Wilfredo Colón
Journal:  Biochemistry       Date:  2004-09-07       Impact factor: 3.162

8.  Production, purification, and characterization of a highly glucose-tolerant novel beta-glucosidase from Candida peltata.

Authors:  B C Saha; R J Bothast
Journal:  Appl Environ Microbiol       Date:  1996-09       Impact factor: 4.792

9.  InterProScan: protein domains identifier.

Authors:  E Quevillon; V Silventoinen; S Pillai; N Harte; N Mulder; R Apweiler; R Lopez
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

10.  Cloning, expression and characterization of an ethanol tolerant GH3 β-glucosidase from Myceliophthora thermophila.

Authors:  Anthi Karnaouri; Evangelos Topakas; Thomas Paschos; Ioanna Taouki; Paul Christakopoulos
Journal:  PeerJ       Date:  2013-02-26       Impact factor: 2.984

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  6 in total

Review 1.  Destructuring plant biomass: focus on fungal and extremophilic cell wall hydrolases.

Authors:  Gea Guerriero; Jean-Francois Hausman; Joseph Strauss; Haluk Ertan; Khawar Sohail Siddiqui
Journal:  Plant Sci       Date:  2015-02-25       Impact factor: 4.729

2.  Glucose-tolerant β-glucosidase retrieved from a Kusaya gravy metagenome.

Authors:  Taku Uchiyama; Katusro Yaoi; Kentaro Miyazaki
Journal:  Front Microbiol       Date:  2015-06-16       Impact factor: 5.640

3.  Molecular Detection and Environment-Specific Diversity of Glycosyl Hydrolase Family 1 β-Glucosidase in Different Habitats.

Authors:  Rameshwar Tiwari; Kanika Kumar; Surender Singh; Lata Nain; Pratyoosh Shukla
Journal:  Front Microbiol       Date:  2016-10-13       Impact factor: 5.640

4.  Increased enzymatic hydrolysis of sugarcane bagasse by a novel glucose- and xylose-stimulated β-glucosidase from Anoxybacillus flavithermus subsp. yunnanensis E13T.

Authors:  Yang Liu; Rui Li; Jing Wang; Xiaohan Zhang; Rong Jia; Yi Gao; Hui Peng
Journal:  BMC Biochem       Date:  2017-03-16       Impact factor: 4.059

5.  Chemical stability of a cold-active cellulase with high tolerance toward surfactants and chaotropic agent.

Authors:  Thaís V Souza; Juscemácia N Araujo; Viviam M da Silva; Marcelo V Liberato; Agnes C Pimentel; Thabata M Alvarez; Fabio M Squina; Wanius Garcia
Journal:  Biotechnol Rep (Amst)       Date:  2015-11-23

Review 6.  Cellulases from Thermophiles Found by Metagenomics.

Authors:  Juan-José Escuder-Rodríguez; María-Eugenia DeCastro; María-Esperanza Cerdán; Esther Rodríguez-Belmonte; Manuel Becerra; María-Isabel González-Siso
Journal:  Microorganisms       Date:  2018-07-10
  6 in total

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