Literature DB >> 24409874

The complete mitochondrial genome of the dark-banded rockfish Sebastes inermis (Scorpaenidae, Scorpaeniformes).

Yo-Soon Jang1,2, Ki-Yong Kim3, Sung-Yong Oh4, Hee-Jung Choi4, Jung-Goo Myoung4, Sung Kim5,6.   

Abstract

The complete mitochondrial genome of the dark-banded rockfish Sebastes inermis was determined using next-generation sequencing, including Sanger sequencing. The full genome was 16,504 bp in length, including 2 rRNA, 22 tRNA and 13 protein-coding genes (PCGs), as well as the control region. The genome was 27.8% A, 26.8% T, 17.1% G and 28.3% C, showing a slight AT bias (54.6%). All PCGs started with an ATG initial codon, except for COX1, which started with a GTG. The stop codon of all PCGs was a TAR, except for Cytb, which contained an incomplete termination codon, T. All tRNAs had the typical clover-leaf structure except tRNA(Ser (AGY)), which lacked the DHU arm. The complete mitogenome of S. inermis will aid the identification and genetic population studies on the genus Sebastes.

Entities:  

Keywords:  Dark-banded rockfish; Sebastes inermis; Sebastinae; mitochondrial genome

Mesh:

Substances:

Year:  2014        PMID: 24409874     DOI: 10.3109/19401736.2013.861448

Source DB:  PubMed          Journal:  Mitochondrial DNA        ISSN: 1940-1736


  4 in total

1.  The first two complete mitochondrial genomes for the family Triglidae and implications for the higher phylogeny of Scorpaeniformes.

Authors:  Lei Cui; Yuelei Dong; Fenghua Liu; Xingchen Gao; Hua Zhang; Li Li; Jingyi Cen; Songhui Lu
Journal:  Sci Rep       Date:  2017-05-08       Impact factor: 4.379

2.  Complete Mitochondrial Genome Sequences of Five Rockfishes (Perciformes: Sebastes).

Authors:  Michael W Sandel; Andres Aguilar; Vincent P Buonaccorsi; Jennifer Herstein; Oleg Evgrafov
Journal:  Mitochondrial DNA B Resour       Date:  2018-08-10       Impact factor: 0.658

3.  The complete mitochondrial genome of rockfish Sebastes oculatus Valenciennes, 1833 from southwest Atlantic ocean.

Authors:  Hana Kim; Moonguen Yoon; Hyung June Kim
Journal:  Mitochondrial DNA B Resour       Date:  2019-10-09       Impact factor: 0.658

4.  Comparative mitogenomics and phylogenetics of the family Carangidae with special emphasis on the mitogenome of the Indian Scad Decapterus russelli.

Authors:  Anjaly Jose; Sandhya Sukumaran; Lakshmi P Mukundan; Neenu Raj; Sujitha Mary; K Nisha; A Gopalakrishnan
Journal:  Sci Rep       Date:  2022-04-04       Impact factor: 4.379

  4 in total

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