Literature DB >> 24409393

Comparison of different metrics for analysis and visualization in spectroscopic optical coherence tomography.

Volker Jaedicke1, Semih Agcaer1, Francisco E Robles2, Marian Steinert3, David Jones3, Sebastian Goebel4, Nils C Gerhardt1, Hubert Welp4, Martin R Hofmann1.   

Abstract

Spectroscopic Optical Coherence Tomography (S-OCT) extracts depth resolved spectra that are inherently available from OCT signals. The back scattered spectra contain useful functional information regarding the sample, since the light is altered by wavelength dependent absorption and scattering caused by chromophores and structures of the sample. Two aspects dominate the performance of S-OCT: (1) the spectral analysis processing method used to obtain the spatially-resolved spectroscopic information and (2) the metrics used to visualize and interpret relevant sample features. In this work, we focus on the second aspect, where we will compare established and novel metrics for S-OCT. These concepts include the adaptation of methods known from multispectral imaging and modern signal processing approaches such as pattern recognition. To compare the performance of the metrics in a quantitative manner, we use phantoms with microsphere scatterers of different sizes that are below the system's resolution and therefore cannot be differentiated using intensity based OCT images. We show that the analysis of the spectral features can clearly separate areas with different scattering properties in multi-layer phantoms. Finally, we demonstrate the performance of our approach for contrast enhancement in bovine articular cartilage.

Entities:  

Keywords:  (170.3880) Medical and biological imaging; (170.4500) Optical coherence tomography; (180.0180) Microscopy; (290.5850) Scattering, particles; (300.0300) Spectroscopy

Year:  2013        PMID: 24409393      PMCID: PMC3862158          DOI: 10.1364/BOE.4.002945

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  37 in total

1.  Detection of preinvasive cancer cells.

Authors:  V Backman; M B Wallace; L T Perelman; J T Arendt; R Gurjar; M G Müller; Q Zhang; G Zonios; E Kline; J A McGilligan; S Shapshay; T Valdez; K Badizadegan; J M Crawford; M Fitzmaurice; S Kabani; H S Levin; M Seiler; R R Dasari; I Itzkan; J Van Dam; M S Feld; T McGillican
Journal:  Nature       Date:  2000-07-06       Impact factor: 49.962

2.  Near-infrared dyes as contrast-enhancing agents for spectroscopic optical coherence tomography.

Authors:  Chenyang Xu; Jian Ye; Daniel L Marks; Stephen A Boppart
Journal:  Opt Lett       Date:  2004-07-15       Impact factor: 3.776

3.  Spectroscopic spectral-domain optical coherence microscopy.

Authors:  Chengyang Xu; Claudio Vinegoni; Tyler S Ralston; Wei Luo; Wei Tan; Stephen A Boppart
Journal:  Opt Lett       Date:  2006-04-15       Impact factor: 3.776

4.  The phasor approach to fluorescence lifetime imaging analysis.

Authors:  Michelle A Digman; Valeria R Caiolfa; Moreno Zamai; Enrico Gratton
Journal:  Biophys J       Date:  2007-11-02       Impact factor: 4.033

5.  Spectral measurement of absorption by spectroscopic frequency-domain optical coherence tomography.

Authors:  R Leitgeb; M Wojtkowski; A Kowalczyk; C K Hitzenberger; M Sticker; A F Fercher
Journal:  Opt Lett       Date:  2000-06-01       Impact factor: 3.776

6.  Precision of extracting absorption profiles from weakly scattering media with spectroscopic time-domain optical coherence tomography.

Authors:  B Hermann; K Bizheva; A Unterhuber; B Povazay; H Sattmann; L Schmetterer; A Fercher; W Drexler
Journal:  Opt Express       Date:  2004-04-19       Impact factor: 3.894

7.  Optical coherence tomography contrast enhancement using spectroscopic analysis with spectral autocorrelation.

Authors:  Desmond Adler; Tony Ko; Paul Herz; James Fujimoto
Journal:  Opt Express       Date:  2004-11-01       Impact factor: 3.894

8.  Separating the scattering and absorption coefficients using the real and imaginary parts of the refractive index with low-coherence interferometry.

Authors:  Francisco E Robles; Adam Wax
Journal:  Opt Lett       Date:  2010-09-01       Impact factor: 3.776

9.  Three-dimensional collagen architecture in bovine articular cartilage.

Authors:  A K Jeffery; G W Blunn; C W Archer; G Bentley
Journal:  J Bone Joint Surg Br       Date:  1991-09

10.  Imaging gold nanorods in excised human breast carcinoma by spectroscopic optical coherence tomography.

Authors:  Amy L Oldenburg; Matthew N Hansen; Tyler S Ralston; Alexander Wei; Stephen A Boppart
Journal:  J Mater Chem       Date:  2009-01-01
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  4 in total

1.  Correlation of the derivative as a robust estimator of scatterer size in optical coherence tomography (OCT).

Authors:  M Kassinopoulos; E Bousi; I Zouvani; C Pitris
Journal:  Biomed Opt Express       Date:  2017-02-21       Impact factor: 3.732

2.  Molecular Imaging in Optical Coherence Tomography.

Authors:  Scott P Mattison; Wihan Kim; Jesung Park; Brian E Applegate
Journal:  Curr Mol Imaging       Date:  2014-07-01

3.  Optical coherence tomography-based parameterization and quantification of articular cartilage surface integrity.

Authors:  Nicolai Brill; Jörn Riedel; Björn Rath; Markus Tingart; Holger Jahr; Marcel Betsch; Valentin Quack; Thomas Pufe; Robert Schmitt; Sven Nebelung
Journal:  Biomed Opt Express       Date:  2015-06-08       Impact factor: 3.732

4.  Mesoscopic Fluorescence Molecular Tomography for Evaluating Engineered Tissues.

Authors:  Mehmet S Ozturk; Chao-Wei Chen; Robin Ji; Lingling Zhao; Bao-Ngoc B Nguyen; John P Fisher; Yu Chen; Xavier Intes
Journal:  Ann Biomed Eng       Date:  2015-12-08       Impact factor: 3.934

  4 in total

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