| Literature DB >> 24403848 |
Olga Simó-Servat1, Cristina Hernández2, Rafael Simó2.
Abstract
There is emerging evidence which indicates the essential role of genetic factors in the development of diabetic retinopathy (DR). In this regard it should be highlighted that genetic factors account for 25-50% of the risk of developing DR. Therefore, the use of genetic analysis to identify those diabetic patients most prone to developing DR might be useful in designing a more individualized treatment. In this regard, there are three main research strategies: candidate gene studies, linkage studies and Genome-Wide Association Studies (GWAS). In the candidate gene approach, several genes encoding proteins closely related to DR development have been analyzed. The linkage studies analyze shared alleles among family members with DR under the assumption that these predispose to a more aggressive development of DR. Finally, Genome-Wide Association Studies (GWAS) are a new tool involving a massive evaluation of single nucleotide polymorphisms (SNP) in large samples. In this review the available information using these three methodologies is critically analyzed. A genetic approach in order to identify new candidates in the pathogenesis of DR would permit us to design more targeted therapeutic strategies in order to decrease this devastating complication of diabetes. Basic researchers, ophthalmologists, diabetologists and geneticists should work together in order to gain new insights into this issue.Entities:
Keywords: Diabetic retinopathy; Genetics; Genome-wide association studies; Linkage studies.
Year: 2013 PMID: 24403848 PMCID: PMC3763680 DOI: 10.2174/13892029113149990008
Source DB: PubMed Journal: Curr Genomics ISSN: 1389-2029 Impact factor: 2.236
Main Studies on Candidate Genes Related to Diabetic Retinopathy
| Genes | Polymorphisms | OR | p | n | Population | Type of Study | thM | Special Features | Reference | |
|---|---|---|---|---|---|---|---|---|---|---|
| rs759853 T allele | 0.49 | 0.0001 | 2207 | - | Meta-analysis | 1 and 2 | Protection against DR in type 1 diabetes. | [27] | ||
| (CA)n microsatellite | z-2 allele | 2.33 | 0.0002 | 1973 | - | Meta-analysis | 1 and 2 | Weaker association in type 1 diabetes than type 2 diabetes. | [27] | |
| z+2 allele | 0.58 | 0.02 | 1693 | - | Meta-analysis | 1 and 2 | Protective effect. | [27] | ||
| rs9640883 | 1.62 | 0.0005 | 514 | Australian | Case-control | 1 and 2 | [25] | |||
| +405 | CC genotype | 3.2 | 0.004 | 452 | Japanese | Case-control | 2 | VEGF serum levels are higher in healthy subjects with the CC genotype. | [33] | |
| - | NS | 919 | Caucasian | Case-control | 2 | No statistical association with DN. | [34] | |||
| GG genotype | 1.87 | 0.039 | 398 | Iranian | Case-control | 2 | The polymorphism increases the risk of PDR vs NPDR. | [35] | ||
| - | NS | 919 | Caucasian | Case-control | 2 | No statistical association with DN. | [34] | |||
| CG genotype | 2.3 | 0.008 | 210 | Indian | Case-control | 2 | Case group: patients with PDR. | [40] | ||
| 1.66 | 0.42 | 213 | South Indian | Case-control | 2 | The distribution of this genotype was significantly higher in patients with DR and microalbuminuria than in those patients with microalbuminuria but without DR. | [43] | |||
| G allele | 0.62 | 0.0005 | 4226 | - | Meta-analysis | 2 | Significant association in patients with NPDR but not in those patients with PDR. | [27] | ||
| All genotypes | - | NS | 469 | Japanese | Case-control | 2 | [44] | |||
| -2578 | AA genotype | 7.5 (Rm) | 0.002 | 469 | Japanese | Case-control | 2 | Results from the duration weighed sub-analysis. | [44] | |
| CA genotype | - | 0.002 | 40 | Caucasian | Case-control | 2 | CC genotype may be associated with susceptibility to diabetic PAD while the CA genotype may be associated with susceptibility to DR. | [36] | ||
| SRp55 2994 | 2.1 | 0.030 | 258 | Caucasian | Case-control | 1 and 2 | Associated with PDR. | [45] | ||
| -374A T/A | 1.25 (T1DM) | NS | 2737 | Scandinavian | Case-control | 1 and 2 | The frequency of the A allele was higher in patients with sight-threatening DR. | [50] | ||
| 1.814 | 0.048 | 528 | South India | Case-control | 2 | Modest association with NPDR. | [51] | |||
| - | NS | 577 | Malaysian | Case-control | 2 | [52] | ||||
| - | NS | 703 | Caucasian, | Case-control | 2 | [53] | ||||
| - | NS | 669 | Chinese | Case-control | 2 | [54] | ||||
| 0.76 | NS | 704 | Indian | Case-control | 2 | Significant association between SNP rs2070600 of RAGE gene and DR. | [56] | |||
| 0.96 | NS | 15194 | Most East Asian and Caucasian | Meta-analysis | 1 and 2 | [61] | ||||
| Gly82Ser | 2.964 | 0.029 | 688 | Chinese | Case-control | 2 | [57] | |||
| - | NS | 210 | Indian | Case-control | 2 | [59] | ||||
| - | NS | 3049 | Asian | Meta-analysis | 2 | [60] | ||||
| 0.95 | NS | 12296 | Most East Asian and Caucasian | Meta-analysis | 1 and 2 | [61] | ||||
| -429 T/C | - | NS | 1917 | Asian and Caucasian. | Meta-analysis | 2 | [60] | |||
| 1.02 | NS | 9550 | Most East Asian and Caucasian | Meta-analysis | 1 and 2 | [61] | ||||
| 2245G/A. A allele | 3.06 | <0.001 | 577 | Malaysian | Case-control | 2 | Both NPDR and PDR. | [62] | ||
| 1704G/T. T allele | - | NS | 1426 | Asian and Caucasian | Meta-analysis | 2 | [60] | |||
| 1.09 | NS | 6145 | Most East Asian and Caucasians | Meta-analysis | 1 and 2 | Subgroup analysis by ethnicity indicated that allele 1704T conferred a significant increase of risk in East Asians but not in Caucasians. | [61] | |||
| 4 a/b polymorphism bb genotype | 2.4 | 0.013 | 575 | West African | Case-control | 2 | [65] | |||
| - | NS | 630 | Caucasian-Brazilian | Case-control | 2 | [67] | ||||
| - | NS | 3377 | - | Meta-analysis | 1 and 2 | [27] | ||||
| 0.846 | 0.015 | 3147 | Most Asian and Caucasian | Meta-analysis | Most 2 | Protective effect. | [69] | |||
| C allele of T786C | 3.4 | <0.001 | 249 | Caucasian | Case-control | 1 | They also found a significant association with diabetes. | [68] | ||
| - | NS | 630 | Caucasian-Brazilian | Case-control | 2 | [67] | ||||
| - | NS | 2147 | Most Caucasian | Meta-analysis | Most 2 | [69] | ||||
| G894T | - | NS | 2819 | Most Caucasian and Asian | Meta-analysis | 2 | [69] | |||
| I/D polymorphism | ID genotype | 1.831 | 0.026 | 384 | Iranian | Case-control | 2 | [71] | ||
| DD genotype | 3.516 | 0.015 | 136 | Iranian | Case-control | 2 | PDR vs. NPDR. | [72] | ||
| DD vs. II: 1.73 | <0.05 | 2224 | Chinese | Met-analysis | Not specified | Subgroup analyses based on the type of DR showed that the effect was significant for PDR but not NPDR. | [73] | |||
| DD+ID vs. II: 1.41 | <0.05 | |||||||||
| DD vs. ID+II: 1.55 | <0.05 | |||||||||
| 2350 G/A AA genotype | 4.4887 | 0.0006 | 235 | Han Chinese | Case-control | 2 | [74] | |||