| Literature DB >> 24401033 |
Alan R Blackburn, Mark W Hamrick, Norman Chutkan, Rajnikumar Sangani, Jennifer L Waller, Raymond Corpe, Puttur D Prasad, Carlos M Isales, Vadivel Ganapathy, Sadanand Fulzele1.
Abstract
BACKGROUND: Nutrient levels are known to influence the development of osteoarthritis (OA), presumably by modulating levels of matrix biosynthesis and degradation. These processes may be affected by ascorbic acid (AA), an antioxidant which acts as a cofactor for numerous biochemical reactions and is essential for post-translational modifications of collagen. In this study we examined the expression of SVCT2, the only known Sodium coupled vitamin C transporter isoform present in articular cartilage, in human articular cartilage explants derived from both normal and osteoarthritis articular cartilage.Entities:
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Year: 2014 PMID: 24401033 PMCID: PMC3922806 DOI: 10.1186/1471-2474-15-9
Source DB: PubMed Journal: BMC Musculoskelet Disord ISSN: 1471-2474 Impact factor: 2.362
Figure 1Spaghetti plot showing decrease expression of SVCT2 in OA3 grade samples. Y-axis showing ∆CT values [∆CT values is the difference between the CT (cycle threshold) values of the target gene (SVCT2) and a housekeeping gene] of OA1 and OA3 samples (n = 29, p < 0.0001). CT levels are inversely proportional to the amount of target in the sample (i, e the lower the CT level the greater the amount of target gene expression in the sample).
List of donors and ∆∆Ct values
| 1 | F | 70 | −2.11 |
| 2 | F | 72 | −6.69 |
| 3 | M | 62 | −8.29 |
| 4 | F | 57 | −3.01 |
| 5 | F | 56 | −4.89 |
| 6 | F | 67 | −0.67 |
| 7 | M | 69 | −2.11 |
| 8 | M | 70 | −1.76 |
| 9 | F | 70 | −0.68 |
| 10 | F | 76 | −6.37 |
| 11 | M | 70 | −4.86 |
| 12 | F | 78 | −4.26 |
| 13 | F | 68 | −3.22 |
| 14 | M | 63 | −3.26 |
| 15 | M | 74 | −1.60 |
| 16 | M | 71 | −1.19 |
| 17 | M | 78 | 0.54 |
| 18 | F | 61 | −4.22 |
| 19 | M | 61 | 0.03 |
| 20 | F | 56 | −0.54 |
| 21 | F | 55 | −2.70 |
| 22 | F | 61 | 1.96 |
| 23 | F | 61 | NA* |
| 24 | M | 63 | −3.35 |
| 25 | M | 63 | 0.19 |
| 26 | M | 77 | −2.49 |
| 27 | M | 73 | −0.88 |
| 28 | F | 69 | −3.02 |
| 29 | F | 45 | −1.24 |
NA* = No ct values/ amplification in OA3.
∆∆CT (delta delta Ct) is the difference between control and experimental samples.It is explained below the Table 2. (∆∆CT SVCT2: Different between control (OA1) ∆CT values and OA3 ∆CT values).
Descriptive statistics t-test results
| ∆∆CT SVCT2 | 29 | −2.5246 | 2.3304 | −2.3000 | <0.0001 |
CT: cycle threshold.
∆CT values: values are the difference between the CT (cycle threshold) values of the target gene and a housekeeping gene.
∆∆CT SVCT2: Different between control (OA1) ∆CT values and OA3 ∆CT values.
Figure 2Representative immunofluorescence localization of SVCT2 protein in OA1 and OA3 Collins scale grade human cartilage tissue. a) 20× and b) 40×. The immunofluorescence analysis was performed using a polyclonal antibody specific for SVCT2. Secondary antibody was anti-goat IgG labeled with FITC. The nuclei were stained with Hoechst dye.