Literature DB >> 24397979

A context dependent role for DNA methylation in bivalves.

Mackenzie R Gavery, Steven B Roberts.   

Abstract

The function of DNA methylation in species such as bivalves where the limited amount of DNA methylation is predominantly found in gene bodies remains unclear. An emerging possible explanation is that the role of gene body DNA methylation is dependent on gene function, a potential phenomenon that has arisen from selective pressure on lineage-specific life history traits. In genes contributing to phenotypes that benefit from increased plasticity, the absence of DNA methylation could contribute to stochastic transcriptional opportunities and increased transposable element activity. In genes where regulated control of activity is essential, DNA methylation may also play a role in targeted, predictable genome regulation. Here, we review the current knowledge concerning DNA methylation in bivalves and explore the putative role of DNA methylation in both an evolutionary and ecological context.
© The Author 2014. Published by Oxford University Press. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  bivalves; epigenetics; invertebrates; methylation; oysters; plasticity

Mesh:

Year:  2014        PMID: 24397979     DOI: 10.1093/bfgp/elt054

Source DB:  PubMed          Journal:  Brief Funct Genomics        ISSN: 2041-2649            Impact factor:   4.241


  12 in total

Review 1.  DNA Methylation in Basal Metazoans: Insights from Ctenophores.

Authors:  Emily C Dabe; Rachel S Sanford; Andrea B Kohn; Yelena Bobkova; Leonid L Moroz
Journal:  Integr Comp Biol       Date:  2015-07-14       Impact factor: 3.326

2.  Inheritance and Variation of Genomic DNA Methylation in Diploid and Triploid Pacific Oyster (Crassostrea gigas).

Authors:  Qun Jiang; Qi Li; Hong Yu; Lingfeng Kong
Journal:  Mar Biotechnol (NY)       Date:  2015-11-19       Impact factor: 3.619

3.  Inference of DNA methylation patterns in molluscs.

Authors:  Lisa Männer; Tilman Schell; Panagiotis Provataris; Martin Haase; Carola Greve
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-04-05       Impact factor: 6.671

4.  Genome-wide profiling of DNA methylation and gene expression in Crassostrea gigas male gametes.

Authors:  Claire E Olson; Steven B Roberts
Journal:  Front Physiol       Date:  2014-06-17       Impact factor: 4.566

5.  Epigenetic considerations in aquaculture.

Authors:  Mackenzie R Gavery; Steven B Roberts
Journal:  PeerJ       Date:  2017-12-07       Impact factor: 2.984

6.  Dynamics of DNA methylomes underlie oyster development.

Authors:  Guillaume Riviere; Yan He; Samuele Tecchio; Elizabeth Crowell; Michaël Gras; Pascal Sourdaine; Ximing Guo; Pascal Favrel
Journal:  PLoS Genet       Date:  2017-06-08       Impact factor: 5.917

7.  Epigenetic signatures of invasive status in populations of marine invertebrates.

Authors:  Alba Ardura; Anastasija Zaiko; Paloma Morán; Serge Planes; Eva Garcia-Vazquez
Journal:  Sci Rep       Date:  2017-02-16       Impact factor: 4.379

8.  Epigenetic features in the oyster Crassostrea gigas suggestive of functionally relevant promoter DNA methylation in invertebrates.

Authors:  Guillaume Rivière
Journal:  Front Physiol       Date:  2014-04-07       Impact factor: 4.566

9.  The Biomphalaria glabrata DNA methylation machinery displays spatial tissue expression, is differentially active in distinct snail populations and is modulated by interactions with Schistosoma mansoni.

Authors:  Kathrin K Geyer; Umar H Niazi; David Duval; Céline Cosseau; Chad Tomlinson; Iain W Chalmers; Martin T Swain; David J Cutress; Utibe Bickham-Wright; Sabrina E Munshi; Christoph Grunau; Timothy P Yoshino; Karl F Hoffmann
Journal:  PLoS Negl Trop Dis       Date:  2017-05-16

10.  Stress related epigenetic changes may explain opportunistic success in biological invasions in Antipode mussels.

Authors:  Alba Ardura; Laura Clusa; Anastasija Zaiko; Eva Garcia-Vazquez; Laura Miralles
Journal:  Sci Rep       Date:  2018-07-17       Impact factor: 4.379

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