| Literature DB >> 24391644 |
David Anak Simon Davis1, Christopher R Parish1.
Abstract
Heparan sulfate (HS) is a highly acidic linear polysaccharide with a very variable structure. It is ubiquitously expressed on cell surfaces and in the extracellular matrix and basement membrane of mammalian tissues. Synthesized attached to various core proteins to form HS-proteoglycans, HS is capable of interacting with various polypeptides and exerting diverse functions. In fact, a bioinformatics analysis of mammalian proteins that express a heparin/HS-binding motif and are associated with the immune system identified 235 candidate proteins, the majority having an intracellular location. This simple analysis suggests that HS may, in fact, interact with many more components of the immune system than previously realized. Numerous studies have also directly demonstrated that HS plays multiple prominent functional roles in the immune system that are briefly reviewed in this article. In particular, the molecule has been shown to regulate leukocyte development, leukocyte migration, immune activation, and inflammatory processes.Entities:
Keywords: glycosaminoglycan; hematopoiesis; heparan sulfate; heparanase; homing; inflammation
Year: 2013 PMID: 24391644 PMCID: PMC3866581 DOI: 10.3389/fimmu.2013.00470
Source DB: PubMed Journal: Front Immunol ISSN: 1664-3224 Impact factor: 7.561
Figure 1The structure of HSPG. HS chains (blue line) are linear polysaccharides composed of repeating disaccharide subunits, which in their unmodified form are d-glucosamine and d-glucuronic acid (blue box). During synthesis, HS chains are covalently attached to core proteins (open circles) at serine (S) residues. A single HSPG molecule may carry multiple HS chains or contain other glycosaminoglycans other than HS (not shown). HS modifications include various degrees of O and N-sulfation and epimerization of d-glucuronic acid to d-iduronic acid by HS-modifying enzymes (red box) (1). The modifications occur in regions (hot spots) along the polysaccharide chain, these hot spots being separated by regions of low sulfation. Post-synthesis structural alterations are primarily mediated by the endo-β-glucuronidase, heparanase, which cleaves HS chains within highly sulfated regions (cleavage site indicated by red scissors and arrow) (3).
Hypothetical HS-interacting proteins.
| Cellular location | Total | Protein |
|---|---|---|
| Intracellular | 154 | Nlrp3, Nkap, Lrp5, Lyst, Lck, Irak4, Sla2, Mx2, Syk, Oasl2, Tcf3, Myo1e, Atp7a, Cplx2, Tusc2, Ak7, Vav3, Blnk, Spta1, Skap1, Fgr, Pmaip1, Aim2, Shb, Ddx60, Dapk3, Nfkb2, Apobec3, Ripk2, Nod1, Sptb, Oas1d, Mapk14, Ptbp3, March8, Dapk1, Zfp385a, Bcl2, Mecom, Chd7, Gpam, Ap3d1, Lcp2, Arid4a, Polr3a, Tnfaip1, Kat6a, Ung, Myo9b, Bcl6, Eprs, Sp3, Bag6, Plcg1, Nbn, Pml, Klf1, Rb1, Sfxn1, Bcl11a, Farp2, Jarid2, Xrcc6, Itk, Myo1f, Nlrc5, Cyp27b1, Ikzf1, Ddx58, Pip4k2a, Ciita, Foxj1, Rnf168, Prkdc, Pms2, Mll1, Stk3, Mef2c, Ahctf1, Prkx, Rag1, Batf3, Map3k14, Ilf2, Herc6, Card11, Card9, Dlg1, Itch, Dyrk3, Tnip3, Cdk6, Irgm1, Rnf31, Apc, Unc13d, Tlr13, Tlr8, Nedd4, Msh6, Pcid2, Sh2b2, Aicda, Myh9, Pik3cd, Zap70, Vav1, Stat5a, Tgtp1, Mx1, Enpp2, Dock2, Pgm3, Unc93b1, Plcg2, Stxbp2, Ifi44l, Zfp35, Inpp5d, Oas3, Cblb, Ostm1, Bcl11b, Eps8, Prkd1, Ctnnbl1, Polr3b, Samhd1, Nlrc4, Tec, Tet2, Map3k5, Pou1f1, Ncaph2, Stat6, Smarca4, Fnip1, Jak3, Cactin, Dicer1, Atm, Ikbkg, Satb1, Eif2ak2, Stap1, Msh3, Sgpl1, Cdk13, Foxe1, Zc3h8, Spib, Maea, March1, Ank1, Mink1 |
| Plasma membrane | 42 | Mpzl2, Adam10, Ntrk1, Icosl, Cxcr5, Cd97, Tlr6, Pde2a, Adam9, Tlr1, Ccr3, Treml2, Tril, Tek, Lrrc8a, Il2ra, Selp, Fas, Hfe, Cd83, Cd22, Ccbp2, Ctla4, Tlr2, Klre1, Gpr183, Ccr7, Abcc9, Hoxb4, H2-M5, Thsd1, Dcstamp, Il7r, Procr, Amica1, Chrnb2, Tnfrsf13c, Csf1r, Tlr4, Tyr, Cd93, Eda, Cd40lg |
| Extracellular | 24 | Masp1, Ccl25, Osm, Il9, Bmp4, Inhba, Pdgfb, Scg2, Hc, Fam20c, Wnt2b, Lrrc17, Gas6, C7, Il1a, Wnt5a, Cxcl12, AI182371, C4b, Cxcl5, C8b, Ccl17, Serping1, Ccl28 |
| Intracellular, plasma membrane, and extracellular | 1 | Hpse |
| Intracellular and plasma membrane | 3 | Blk, Flt1, Flt3 |
| Intracellular and extracellular | 2 | Isg15, Prg4 |
| Plasma membrane and extracellular | 8 | Tgfb1, Vegfa, Enpp3, Ctsg, C8a, Ptpro, Adam17, Enpp1 |
List of murine proteins that carry “consensus” heparin/HS-binding motifs. The motifs adapted for bioinformatic screens are the standard motifs, which are primarily XBBBXXBX or XBBXBX (.