| Literature DB >> 24381861 |
Bahram Golestani Eimani1, Mohammad Hossein Sanati1, Masoud Houshmand1, Mitra Ataei1, Fatemeh Akbarian2, Naser Shakhssalim3.
Abstract
OBJECTIVE: To evaluate the mRNA expression ratio of Bcl-2/Bax both in normal and tumoral bladder tissues of patients with transitional cell carcinoma (TCC) of bladder and investigate potential correlation between this expression ratio and clinical outcome.Entities:
Keywords: Apoptosis; Bax; Bcl-2; Bladder; Clinical Outcome
Year: 2013 PMID: 24381861 PMCID: PMC3866540
Source DB: PubMed Journal: Cell J ISSN: 2228-5806 Impact factor: 2.479
Protocol of real-time PCR
| Fragments | Initial denaturation | Number of cycles | Denaturation | Annealing | Extention |
|---|---|---|---|---|---|
| 95˚C-15minutes | 40 | 95˚C-10seconds | 49˚C-15seconds | 72˚C- 20seconds | |
| 95˚C-15minutes | 40 | 95˚C-10seconds | 51˚C-15seconds | 72˚C- 20seconds | |
| 95˚C-15minutes | 40 | 95˚C-10seconds | 64˚C-15seconds | 72˚C- 20seconds | |
Expression ratio of Bcl-2/Bax mRNA evaluated by real time PCR and 2-ΔΔCt method in bladder tumors
| Patients | Stage | Grade | Relative expression of BCL-2/BAX | Time until relapse or disease-free(months) |
|---|---|---|---|---|
| pT1 | Low | - | <3 | |
| pT1 | Low | 0.013 | 14 | |
| pT1 | Low | 0.001 | 14 | |
| pT1 | Low | 0.006 | 14 | |
| pT1 | Low | 0.09 | 14 | |
| pT1 | Low | - | <3 | |
| pT1 | Low | 0.03 | 14 | |
| pT1 | Low | 0.05 | 14 | |
| pT1 | Low | 7.94 | 6 | |
| pT1 | Low | - | <3 | |
| pT1 | Low | 2.35 | 5 | |
| pT1 | Low | 0.4 | 15 | |
| pT1 | Low | 2.3 | 9 | |
| pT1 | Low | 2.2 | 7 | |
| pT1 | Low | 0.19 | 14 | |
| pT1 | Low | 0.004 | 27 | |
| pT1 | Low | - | <3 | |
| pT1 | Low | - | <3 | |
| pT1 | Low | 0.37 | 26 | |
| pT1 | Low | 0.003 | 25 | |
| pT1 | Low | 0.27 | 26 | |
| pT1 | Low | 6.8 | 6 | |
| pTa | Low | 0.001 | 14 | |
| pT1 | Low | 0.44 | 27 | |
| pT1 | Low | - | <3 | |
| pT1 | Low | 0.18 | 18 | |
| pT1 | Low | - | <3 | |
| pT1 | Low | 0.007 | 18 | |
| pT1 | Low | 0.04 | 30 | |
| pT1 | Low | 2.6 | 5 | |
| pT1 | Low | - | <3 | |
| pT4 | high | 0.0005 | 18 | |
| pT3 | high | 0.003 | 16 | |
| pT1 | high | 1.5 | 5 | |
| pT2 | high | 4.85 | 8 | |
| pT1 | high | 6.15 | 4 | |
| pT1 | high | 3.1 | 7 | |
| pT1 | high | 3.9 | 6 | |
| pT2 | low | 2.7 | 7 | |
| pT1 | high | - | <3 | |
Patients whose tumoral tissue Bax gene expression was not detected by real-time PCR.
Sequences of the primers used in real-time PCR assays
| Name | 5'-3' | Tm | PCR product size (bp) |
|---|---|---|---|
| GGTTGTCGCCCTTTTCTA | 48.84 | 108 | |
| CGGAGGAAGTCCAATGTC | 49.1 | ||
| GCGAGAAGATGACCCAGAT | 50.87 | 88 | |
| GAGGCGTACAGGGATAGC | 50.97 | ||
| GATGTGATGCCTCTGCGAAG | 65 | 93 | |
| CATGCTGATGTCTCTGGAATCT | 6 | ||