Literature DB >> 24370983

SECRETOOL: integrated secretome analysis tool for fungi.

Ana R Cortázar1, Ana M Aransay, Manuel Alfaro, José A Oguiza, José L Lavín.   

Abstract

The secretome (full set of secreted proteins) has been studied in multiple fungal genomes to elucidate the potential role of those protein collections involved in a number of metabolic processes from host infection to wood degradation. Being aminoacid composition a key factor to recognize secretory proteins, SECRETOOL comprises a group of web tools that enable secretome predictions out of aminoacid sequence files, up to complete fungal proteomes, in one step. SECRETOOL is freely available on the web at http://genomics.cicbiogune.es/SECRETOOL/Secretool.php .

Entities:  

Mesh：

Substances：

Year:  2013        PMID： 24370983     DOI： 10.1007/s00726-013-1649-z

Source DB:  PubMed          Journal:  Amino Acids        ISSN： 0939-4451            Impact factor:   3.520


  18 in total

Review 1.  Computational Prediction of Effector Proteins in Fungi: Opportunities and Challenges.

Authors:  Humira Sonah; Rupesh K Deshmukh; Richard R Bélanger
Journal:  Front Plant Sci       Date:  2016-02-12       Impact factor: 5.753

2.  Comparative genome analyses suggest a hemibiotrophic lifestyle and virulence differences for the beech bark disease fungal pathogens Neonectria faginata and Neonectria coccinea.

Authors:  Catalina Salgado-Salazar; Demetra N Skaltsas; Tunesha Phipps; Lisa A Castlebury
Journal:  G3 (Bethesda)       Date:  2021-04-15       Impact factor: 3.154

Review 3.  Destructuring plant biomass: focus on fungal and extremophilic cell wall hydrolases.

Authors:  Gea Guerriero; Jean-Francois Hausman; Joseph Strauss; Haluk Ertan; Khawar Sohail Siddiqui
Journal:  Plant Sci       Date:  2015-02-25       Impact factor: 4.729

4.  IMA Genome-F 4: Draft genome sequences of Chrysoporthe austroafricana, Diplodia scrobiculata, Fusarium nygamai, Leptographium lundbergii, Limonomyces culmigenus, Stagonosporopsis tanaceti, and Thielaviopsis punctulata.

Authors:  Brenda D Wingfield; Peter K Ades; Fatima A Al-Naemi; Lisa A Beirn; Wubetu Bihon; Jo Anne Crouch; Z Wilhelm de Beer; Lieschen De Vos; Tuan A Duong; Christopher J Fields; Gerda Fourie; Aquillah M Kanzi; Martha Malapi-Wight; Sarah J Pethybridge; Osman Radwan; Gloria Rendon; Bernard Slippers; Quentin C Santana; Emma T Steenkamp; Paul W J Taylor; Niloofar Vaghefi; Nicolaas A van der Merwe; Daniel Veltri; Michael J Wingfield
Journal:  IMA Fungus       Date:  2015-06-22       Impact factor: 3.515

5.  Genome-wide analysis of excretory/secretory proteins in Echinococcus multilocularis: insights into functional characteristics of the tapeworm secretome.

Authors:  Shuai Wang; Wei Wei; Xuepeng Cai
Journal:  Parasit Vectors       Date:  2015-12-30       Impact factor: 3.876

6.  Comparative Transcriptomic Analysis of Virulence Factors in Leptosphaeria maculans during Compatible and Incompatible Interactions with Canola.

Authors:  Humira Sonah; Xuehua Zhang; Rupesh K Deshmukh; M Hossein Borhan; W G Dilantha Fernando; Richard R Bélanger
Journal:  Front Plant Sci       Date:  2016-12-01       Impact factor: 5.753

7.  Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales.

Authors:  Raúl Castanera; Gúmer Pérez; Leticia López-Varas; Joëlle Amselem; Kurt LaButti; Vasanth Singan; Anna Lipzen; Sajeet Haridas; Kerrie Barry; Igor V Grigoriev; Antonio G Pisabarro; Lucía Ramírez
Journal:  BMC Genomics       Date:  2017-11-16       Impact factor: 3.969

8.  Secretome Analysis of Arabidopsis-Trichoderma atroviride Interaction Unveils New Roles for the Plant Glutamate:Glyoxylate Aminotransferase GGAT1 in Plant Growth Induced by the Fungus and Resistance against Botrytis cinerea.

Authors:  María Del Carmen González-López; Saúl Jijón-Moreno; Mitzuko Dautt-Castro; Cesaré Ovando-Vázquez; Tamar Ziv; Benjamin A Horwitz; Sergio Casas-Flores
Journal:  Int J Mol Sci       Date:  2021-06-24       Impact factor: 5.923

9.  A Multiomic Approach to Understand How Pleurotus eryngii Transforms Non-Woody Lignocellulosic Material.

Authors:  Ander Peña; Rashid Babiker; Delphine Chaduli; Anna Lipzen; Mei Wang; Mansi Chovatia; Jorge Rencoret; Gisela Marques; María Isabel Sánchez-Ruiz; Teeratas Kijpornyongpan; Davinia Salvachúa; Susana Camarero; Vivian Ng; Ana Gutiérrez; Igor V Grigoriev; Marie-Noëlle Rosso; Angel T Martínez; Francisco J Ruiz-Dueñas
Journal:  J Fungi (Basel)       Date:  2021-05-28

10.  Secretome of the biocontrol agent metarhizium anisopliae induced by the cuticle of the cotton pest Dysdercus peruvianus reveals new insights into infection.

Authors:  Walter O Beys-da-Silva; Lucélia Santi; Markus Berger; Diego Calzolari; Dario O Passos; Jorge A Guimarães; James J Moresco; John R Yates
Journal:  J Proteome Res       Date:  2014-04-17       Impact factor: 4.466
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.