Literature DB >> 24370252

Watching single proteins using engineered nanopores.

Liviu Movileanu1.   

Abstract

Recent studies in the area of single-molecule detection of proteins with nanopores show a great promise in fundamental science, bionanotechnology and proteomics. In this mini-review, I discuss a comprehensive array of examinations of protein detection and characterization using protein and solid-state nanopores. These investigations demonstrate the power of the single-molecule nanopore measurements to reveal a broad range of functional, structural, biochemical and biophysical features of proteins, such as their backbone flexibility, enzymatic activity, binding affinity as well as their concentration, size and folding state. Engineered nanopores in organic materials and in inorganic membranes coupled with surface modification and protein engineering might provide a new generation of sensing devices for molecular biomedical diagnostics.

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Year:  2014        PMID: 24370252      PMCID: PMC3924890          DOI: 10.2174/09298665113209990078

Source DB:  PubMed          Journal:  Protein Pept Lett        ISSN: 0929-8665            Impact factor:   1.890


  127 in total

1.  The chloroplast protein import channel Toc75: pore properties and interaction with transit peptides.

Authors:  Silke C Hinnah; Richard Wagner; Natalia Sveshnikova; Roswitha Harrer; Jürgen Soll
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

2.  An adsorption-based model for pulse duration in resistive-pulse protein sensing.

Authors:  Lindsay T Sexton; Hitomi Mukaibo; Parag Katira; Henry Hess; Stefanie A Sherrill; Lloyd P Horne; Charles R Martin
Journal:  J Am Chem Soc       Date:  2010-05-19       Impact factor: 15.419

3.  Temperature-responsive protein pores.

Authors:  Yuni Jung; Hagan Bayley; Liviu Movileanu
Journal:  J Am Chem Soc       Date:  2006-11-29       Impact factor: 15.419

4.  Probing protein-protein interactions by dynamic force correlation spectroscopy.

Authors:  V Barsegov; D Thirumalai
Journal:  Phys Rev Lett       Date:  2005-10-10       Impact factor: 9.161

5.  Protein biosensors based on biofunctionalized conical gold nanotubes.

Authors:  Zuzanna Siwy; Lacramioara Trofin; Punit Kohli; Lane A Baker; Christina Trautmann; Charles R Martin
Journal:  J Am Chem Soc       Date:  2005-04-13       Impact factor: 15.419

Review 6.  Protein translocation across biological membranes.

Authors:  William Wickner; Randy Schekman
Journal:  Science       Date:  2005-12-02       Impact factor: 47.728

7.  A genetically encoded pore for the stochastic detection of a protein kinase.

Authors:  Stephen Cheley; Hongzhi Xie; Hagan Bayley
Journal:  Chembiochem       Date:  2006-12       Impact factor: 3.164

8.  Inserting and manipulating DNA in a nanopore with optical tweezers.

Authors:  U F Keyser; J van der Does; C Dekker; N H Dekker
Journal:  Methods Mol Biol       Date:  2009

9.  Aqueous two-phase system formation kinetics for elastin-like polypeptides of varying chain length.

Authors:  Yanjie Zhang; Kimberly Trabbic-Carlson; Fernando Albertorio; Ashutosh Chilkoti; Paul S Cremer
Journal:  Biomacromolecules       Date:  2006-07       Impact factor: 6.988

10.  Probing alamethicin channels with water-soluble polymers. Effect on conductance of channel states.

Authors:  S M Bezrukov; I Vodyanoy
Journal:  Biophys J       Date:  1993-01       Impact factor: 4.033

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  6 in total

1.  Fingerprinting of Peptides with a Large Channel of Bacteriophage Phi29 DNA Packaging Motor.

Authors:  Zhouxiang Ji; Shaoying Wang; Zhengyi Zhao; Zhi Zhou; Farzin Haque; Peixuan Guo
Journal:  Small       Date:  2016-07-20       Impact factor: 13.281

2.  Communication: Charge, diffusion, and mobility of proteins through nanopores.

Authors:  M Muthukumar
Journal:  J Chem Phys       Date:  2014-08-28       Impact factor: 3.488

3.  Engineering a Novel Porin OmpGF Via Strand Replacement from Computational Analysis of Sequence Motif.

Authors:  Meishan Lin; Ge Zhang; Monifa Fahie; Leslie K Morgan; Min Chen; Timothy A Keiderling; Linda J Kenney; Jie Liang
Journal:  Biochim Biophys Acta Biomembr       Date:  2017-03-21       Impact factor: 3.747

4.  Label-free nanopore single-molecule measurement of trypsin activity.

Authors:  Shuo Zhou; Liang Wang; Xiaohan Chen; Xiyun Guan
Journal:  ACS Sens       Date:  2016-03-24       Impact factor: 7.711

5.  A pH-independent quiet OmpG pore with enhanced electrostatic repulsion among the extracellular loops.

Authors:  Bach Pham; Christina M Chisholm; Joshua Foster; Emily Friis; Monifa A Fahie; Min Chen
Journal:  Biochim Biophys Acta Biomembr       Date:  2020-10-13       Impact factor: 3.747

6.  Capturing single molecules by nanopores: measured times and thermodynamics.

Authors:  Alexander M Berezhkovskii; Sergey M Bezrukov
Journal:  Phys Chem Chem Phys       Date:  2021-01-21       Impact factor: 3.676

  6 in total

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