Literature DB >> 24363142

Control not at initiation? Bah, humbug!

William C Merrick1, Michael E Harris.   

Abstract

Initiation is often assumed to be rate-limiting for protein synthesis, but the presence of rare codons nonetheless can influence protein levels. In this issue of The EMBO Journal, Chu et al report that when rare codons are positioned near the start of the coding region, 'liberation' of the initiation codon for loading of the next 40S subunit may be rate‐limiting for initiation and therefore overall protein synthesis. The sequential nature of translation results in an interdependence in ribosome association either by de novo initiation or recycling. Thus, a more general view emerges where both elongation and initiation can contribute to protein expression.

Entities:  

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Year:  2013        PMID: 24363142      PMCID: PMC3990677          DOI: 10.1002/embj.201387388

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  8 in total

1.  Partition analysis and the concept of net rate constants as tools in enzyme kinetics.

Authors:  W W Cleland
Journal:  Biochemistry       Date:  1975-07-15       Impact factor: 3.162

2.  Eukaryotic protein synthesis: still a mystery.

Authors:  William C Merrick
Journal:  J Biol Chem       Date:  2010-05-05       Impact factor: 5.157

3.  Translation elongation can control translation initiation on eukaryotic mRNAs.

Authors:  Dominique Chu; Eleanna Kazana; Noémie Bellanger; Tarun Singh; Mick F Tuite; Tobias von der Haar
Journal:  EMBO J       Date:  2013-12-19       Impact factor: 11.598

4.  Regulation of mRNA entry into polysomes. Parameters affecting polysome size and the fraction of mRNA in polysomes.

Authors:  E M Nelson; M M Winkler
Journal:  J Biol Chem       Date:  1987-08-25       Impact factor: 5.157

5.  Rate-limiting step: a quantitative definition. Application to steady-state enzymic reactions.

Authors:  W J Ray
Journal:  Biochemistry       Date:  1983-09-27       Impact factor: 3.162

6.  Evidence for control of protein synthesis in HeLa cells via the elongation rate.

Authors:  P J Nielsen; E H McConkey
Journal:  J Cell Physiol       Date:  1980-09       Impact factor: 6.384

7.  Circularization of mRNA by eukaryotic translation initiation factors.

Authors:  S E Wells; P E Hillner; R D Vale; A B Sachs
Journal:  Mol Cell       Date:  1998-07       Impact factor: 17.970

8.  Rate-limiting steps in yeast protein translation.

Authors:  Premal Shah; Yang Ding; Malwina Niemczyk; Grzegorz Kudla; Joshua B Plotkin
Journal:  Cell       Date:  2013-06-20       Impact factor: 41.582

  8 in total
  4 in total

1.  Mechanism of cytoplasmic mRNA translation.

Authors:  Karen S Browning; Julia Bailey-Serres
Journal:  Arabidopsis Book       Date:  2015-04-24

2.  Expression of eukaryotic initiation factor 4E and 4E binding protein 1 in colorectal carcinogenesis.

Authors:  Mona Diab-Assaf; Raefa Abou-Khouzam; Nina Saadallah-Zeidan; Khaled Habib; Nizar Bitar; Walid Karam; Bertrand Liagre; Steve Harakeh; Rania Azar
Journal:  Int J Clin Exp Pathol       Date:  2015-01-01

Review 3.  Synonymous Codons: Choose Wisely for Expression.

Authors:  Christina E Brule; Elizabeth J Grayhack
Journal:  Trends Genet       Date:  2017-03-12       Impact factor: 11.639

4.  Ribosome reinitiation can explain length-dependent translation of messenger RNA.

Authors:  David W Rogers; Marvin A Böttcher; Arne Traulsen; Duncan Greig
Journal:  PLoS Comput Biol       Date:  2017-06-09       Impact factor: 4.475

  4 in total

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