Literature DB >> 24357370

Cryo-electron microscopy of membrane proteins.

Kenneth N Goldie1, Priyanka Abeyrathne, Fabian Kebbel, Mohamed Chami, Philippe Ringler, Henning Stahlberg.   

Abstract

Electron crystallography is used to study membrane proteins in the form of planar, two-dimensional (2D) crystals, or other crystalline arrays such as tubular crystals. This method has been used to determine the atomic resolution structures of bacteriorhodopsin, tubulin, aquaporins, and several other membrane proteins. In addition, a large number of membrane protein structures were studied at a slightly lower resolution, whereby at least secondary structure motifs could be identified.In order to conserve the structural details of delicate crystalline arrays, cryo-electron microscopy (cryo-EM) allows imaging and/or electron diffraction of membrane proteins in their close-to-native state within a lipid bilayer membrane.To achieve ultimate high-resolution structural information of 2D crystals, meticulous sample preparation for electron crystallography is of outmost importance. Beam-induced specimen drift and lack of specimen flatness can severely affect the attainable resolution of images for tilted samples. Sample preparations that sandwich the 2D crystals between symmetrical carbon films reduce the beam-induced specimen drift, and the flatness of the preparations can be optimized by the choice of the grid material and the preparation protocol.Data collection in the cryo-electron microscope using either the imaging or the electron diffraction mode has to be performed applying low-dose procedures. Spot-scanning further reduces the effects of beam-induced drift. Data collection using automated acquisition schemes, along with improved and user-friendlier data processing software, is increasingly being used and is likely to bring the technique to a wider user base.

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Year:  2014        PMID: 24357370     DOI: 10.1007/978-1-62703-776-1_15

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  9 in total

Review 1.  Cryo-electron tomography: an ideal method to study membrane-associated proteins.

Authors:  Michelle A Dunstone; Alex de Marco
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-08-05       Impact factor: 6.237

Review 2.  Nanodiscs in Membrane Biochemistry and Biophysics.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Chem Rev       Date:  2017-02-08       Impact factor: 60.622

Review 3.  Protein adsorption onto nanomaterials for the development of biosensors and analytical devices: a review.

Authors:  Samir A Bhakta; Elizabeth Evans; Tomás E Benavidez; Carlos D Garcia
Journal:  Anal Chim Acta       Date:  2014-10-29       Impact factor: 6.558

4.  Maltose-bis(hydroxymethyl)phenol (MBPs) and Maltose-tris(hydroxymethyl)phenol (MTPs) Amphiphiles for Membrane Protein Stability.

Authors:  Muhammad Ehsan; Haoqing Wang; Cristina Cecchetti; Jonas S Mortensen; Yang Du; Parameswaran Hariharan; Andreas Nygaard; Ho Jin Lee; Lubna Ghani; Lan Guan; Claus J Loland; Bernadette Byrne; Brian K Kobilka; Pil Seok Chae
Journal:  ACS Chem Biol       Date:  2021-08-26       Impact factor: 4.634

Review 5.  Using X-ray Footprinting and Mass Spectrometry to Study the Structure and Function of Membrane Proteins.

Authors:  Sayan Gupta
Journal:  Protein Pept Lett       Date:  2019       Impact factor: 1.890

Review 6.  Characterisation of sensor kinase by CD spectroscopy: golden rules and tips.

Authors:  Giuliano Siligardi; Charlotte S Hughes; Rohanah Hussain
Journal:  Biochem Soc Trans       Date:  2018-12-04       Impact factor: 5.407

7.  Time-resolved structural studies with serial crystallography: A new light on retinal proteins.

Authors:  Valérie Panneels; Wenting Wu; Ching-Ju Tsai; Przemek Nogly; Jan Rheinberger; Kathrin Jaeger; Gregor Cicchetti; Cornelius Gati; Leonhard M Kick; Leonardo Sala; Guido Capitani; Chris Milne; Celestino Padeste; Bill Pedrini; Xiao-Dan Li; Jörg Standfuss; Rafael Abela; Gebhard Schertler
Journal:  Struct Dyn       Date:  2015-06-29       Impact factor: 2.920

Review 8.  Electron Paramagnetic Resonance as a Tool for Studying Membrane Proteins.

Authors:  Indra D Sahu; Gary A Lorigan
Journal:  Biomolecules       Date:  2020-05-13

9.  Solution Structures of Bacillus anthracis Protective Antigen Proteins Using Small Angle Neutron Scattering and Protective Antigen 63 Ion Channel Formation Kinetics.

Authors:  Ariel Michelman-Ribeiro; Kenneth A Rubinson; Vitalii Silin; John J Kasianowicz
Journal:  Toxins (Basel)       Date:  2021-12-11       Impact factor: 4.546

  9 in total

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