Literature DB >> 24345612

Chromatin regulators of genomic imprinting.

Jamie R Weaver1, Marisa S Bartolomei2.   

Abstract

Genomic imprinting is an epigenetic phenomenon in which genes are expressed monoallelically in a parent-of-origin-specific manner. Each chromosome is imprinted with its parental identity. Here we will discuss the nature of this imprinting mark. DNA methylation has a well-established central role in imprinting, and the details of DNA methylation dynamics and the mechanisms that target it to imprinted loci are areas of active investigation. However, there is increasing evidence that DNA methylation is not solely responsible for imprinted expression. At the same time, there is growing appreciation for the contributions of post-translational histone modifications to the regulation of imprinting. The integration of our understanding of these two mechanisms is an important goal for the future of the imprinting field. This article is part of a Special Issue entitled: Chromatin and epigenetic regulation of animal development.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  DNA methylation; Epigenetics; Genomic imprinting; Histone modification; Polycomb

Mesh:

Substances:

Year:  2013        PMID: 24345612      PMCID: PMC3951659          DOI: 10.1016/j.bbagrm.2013.12.002

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  104 in total

1.  Polycomb group proteins Ring1A/B link ubiquitylation of histone H2A to heritable gene silencing and X inactivation.

Authors:  Mariana de Napoles; Jacqueline E Mermoud; Rika Wakao; Y Amy Tang; Mitusuhiro Endoh; Ruth Appanah; Tatyana B Nesterova; Jose Silva; Arie P Otte; Miguel Vidal; Haruhiko Koseki; Neil Brockdorff
Journal:  Dev Cell       Date:  2004-11       Impact factor: 12.270

2.  Multiple mechanisms regulate imprinting of the mouse distal chromosome 7 gene cluster.

Authors:  T Caspary; M A Cleary; C C Baker; X J Guan; S M Tilghman
Journal:  Mol Cell Biol       Date:  1998-06       Impact factor: 4.272

3.  KAP-1, a novel corepressor for the highly conserved KRAB repression domain.

Authors:  J R Friedman; W J Fredericks; D E Jensen; D W Speicher; X P Huang; E G Neilson; F J Rauscher
Journal:  Genes Dev       Date:  1996-08-15       Impact factor: 11.361

4.  Complementation of methylation deficiency in embryonic stem cells by a DNA methyltransferase minigene.

Authors:  K L Tucker; D Talbot; M A Lee; H Leonhardt; R Jaenisch
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-12       Impact factor: 11.205

5.  Parental origin-specific expression of Mash2 is established at the time of implantation with its imprinting mechanism highly resistant to genome-wide demethylation.

Authors:  M Tanaka; M Puchyr; M Gertsenstein; K Harpal; R Jaenisch; J Rossant; A Nagy
Journal:  Mech Dev       Date:  1999-09       Impact factor: 1.882

6.  Acquisition of the H19 methylation imprint occurs differentially on the parental alleles during spermatogenesis.

Authors:  T L Davis; J M Trasler; S B Moss; G J Yang; M S Bartolomei
Journal:  Genomics       Date:  1999-05-15       Impact factor: 5.736

7.  Sex-specific exons control DNA methyltransferase in mammalian germ cells.

Authors:  C Mertineit; J A Yoder; T Taketo; D W Laird; J M Trasler; T H Bestor
Journal:  Development       Date:  1998-03       Impact factor: 6.868

8.  De novo DNA cytosine methyltransferase activities in mouse embryonic stem cells.

Authors:  H Lei; S P Oh; M Okano; R Jüttermann; K A Goss; R Jaenisch; E Li
Journal:  Development       Date:  1996-10       Impact factor: 6.868

9.  Deletion of the H19 differentially methylated domain results in loss of imprinted expression of H19 and Igf2.

Authors:  J L Thorvaldsen; K L Duran; M S Bartolomei
Journal:  Genes Dev       Date:  1998-12-01       Impact factor: 11.361

10.  A maternal-zygotic effect gene, Zfp57, maintains both maternal and paternal imprints.

Authors:  Xiajun Li; Mitsuteru Ito; Fen Zhou; Neil Youngson; Xiaopan Zuo; Philip Leder; Anne C Ferguson-Smith
Journal:  Dev Cell       Date:  2008-10       Impact factor: 12.270

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  16 in total

Review 1.  Histone methyltransferases: novel targets for tumor and developmental defects.

Authors:  Xin Yi; Xue-Jun Jiang; Xiao-Yan Li; Ding-Sheng Jiang
Journal:  Am J Transl Res       Date:  2015-11-15       Impact factor: 4.060

Review 2.  What does genetics tell us about imprinting and the placenta connection?

Authors:  Susannah Varmuza; Kamelia Miri
Journal:  Cell Mol Life Sci       Date:  2014-09-07       Impact factor: 9.261

Review 3.  Role of genomic imprinting in mammalian development.

Authors:  Thushara Thamban; Viplove Agarwaal; Sanjeev Khosla
Journal:  J Biosci       Date:  2020       Impact factor: 1.826

4.  Whole transcriptome analysis reveals a role for OGG1-initiated DNA repair signaling in airway remodeling.

Authors:  Leopoldo Aguilera-Aguirre; Koa Hosoki; Attila Bacsi; Zsolt Radák; Sanjiv Sur; Muralidhar L Hegde; Bing Tian; Alfredo Saavedra-Molina; Allan R Brasier; Xueqing Ba; Istvan Boldogh
Journal:  Free Radic Biol Med       Date:  2015-07-15       Impact factor: 7.376

5.  Association between sperm mitochondarial DNA copy number and nuclear DNA methylation.

Authors:  Oladele A Oluwayiose; Srinihaari Josyula; Emily Houle; Chelsea Marcho; Tayyab Rahil; Cynthia K Sites; J Richard Pilsner
Journal:  Epigenomics       Date:  2020-12-15       Impact factor: 4.778

6.  Transcriptional read-through is not sufficient to induce an epigenetic switch in the silencing activity of Polycomb response elements.

Authors:  Maksim Erokhin; Pavel Elizar'ev; Aleksander Parshikov; Paul Schedl; Pavel Georgiev; Darya Chetverina
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-26       Impact factor: 11.205

Review 7.  Genomic imprinting effects on complex traits in domesticated animal species.

Authors:  Alan M O'Doherty; David E MacHugh; Charles Spillane; David A Magee
Journal:  Front Genet       Date:  2015-04-24       Impact factor: 4.599

8.  ATRX Plays a Key Role in Maintaining Silencing at Interstitial Heterochromatic Loci and Imprinted Genes.

Authors:  Hsiao P J Voon; Jim R Hughes; Christina Rode; Inti A De La Rosa-Velázquez; Thomas Jenuwein; Robert Feil; Douglas R Higgs; Richard J Gibbons
Journal:  Cell Rep       Date:  2015-04-09       Impact factor: 9.423

Review 9.  Genomic Imprinting.

Authors:  Emirjeta Bajrami; Mirko Spiroski
Journal:  Open Access Maced J Med Sci       Date:  2016-02-04

10.  In vivo targeting of de novo DNA methylation by histone modifications in yeast and mouse.

Authors:  Marco Morselli; William A Pastor; Barbara Montanini; Kevin Nee; Roberto Ferrari; Kai Fu; Giancarlo Bonora; Liudmilla Rubbi; Amander T Clark; Simone Ottonello; Steven E Jacobsen; Matteo Pellegrini
Journal:  Elife       Date:  2015-04-07       Impact factor: 8.140

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