Literature DB >> 2434470

Evolutionary relationship of denitrifying bacteria as deduced from 5S rRNA sequences.

S Ohkubo, H Iwasaki, H Hori, S Osawa.   

Abstract

The nucleotide sequences of 5S rRNA from seven denitrifying bacteria have been determined. Based on these sequences and those reported in the literature (including two denitrifiers), a phylogenic tree of 104 eubacterial 5S rRNA sequences has been constructed to establish the position of the denitrifying bacteria. These bacteria belong to either one of the three major subgroups of gram-negative bacteria. The grouping based on 5S rRNA sequences is almost compatible with the type of the nitrite reductases, with the one apparent exception of Paracoccus denitrificans ATCC 13543. Moreover, the separation time of most of the denitrifying bacteria from other non-denitrifying bacteria belonging to the same subgroup is recent. These results suggest that the denitrifying systems in these bacteria would have developed polyphyletically, and not so anciently, during eubacterial evolution.

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Year:  1986        PMID: 2434470     DOI: 10.1093/oxfordjournals.jbchem.a121832

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  7 in total

1.  PCR detection of genes encoding nitrite reductase in denitrifying bacteria.

Authors:  S Hallin; P E Lindgren
Journal:  Appl Environ Microbiol       Date:  1999-04       Impact factor: 4.792

2.  Dissimilatory nitrite reductase genes from autotrophic ammonia-oxidizing bacteria.

Authors:  K L Casciotti; B B Ward
Journal:  Appl Environ Microbiol       Date:  2001-05       Impact factor: 4.792

3.  Sequence, proposed secondary structure, and phylogenetic analysis of the chloroplast 5S rRNA gene of the brown alga Pylaiella littoralis (L.) Kjellm.

Authors:  C C Somerville; S Jouannic; S Loiseaux-de Goër
Journal:  J Mol Evol       Date:  1992-03       Impact factor: 2.395

4.  Nucleotide sequence of 5S ribosomal RNA from Rhodococcus erythropolis.

Authors:  Y H Park; H Hori; K Suzuki; S Osawa; K Komagata
Journal:  Nucleic Acids Res       Date:  1987-01-12       Impact factor: 16.971

Review 5.  Cell biology and molecular basis of denitrification.

Authors:  W G Zumft
Journal:  Microbiol Mol Biol Rev       Date:  1997-12       Impact factor: 11.056

6.  Evolution of the recA gene and the molecular phylogeny of bacteria.

Authors:  A T Lloyd; P M Sharp
Journal:  J Mol Evol       Date:  1993-10       Impact factor: 2.395

7.  Immunological identification and distribution of dissimilatory heme cd1 and nonheme copper nitrite reductases in denitrifying bacteria.

Authors:  M S Coyne; A Arunakumari; B A Averill; J M Tiedje
Journal:  Appl Environ Microbiol       Date:  1989-11       Impact factor: 4.792

  7 in total

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