Literature DB >> 24337770

Development of FRET biosensors for mammalian and plant systems.

Danny Hamers1, Laura van Voorst Vader, Jan Willem Borst, Joachim Goedhart.   

Abstract

Genetically encoded biosensors are increasingly used in visualising signalling processes in different organisms. Sensors based on green fluorescent protein technology are providing a great opportunity for using Förster resonance energy transfer (FRET) as a tool that allows for monitoring dynamic processes in living cells. The development of these FRET biosensors requires careful selection of fluorophores, substrates and recognition domains. In this review, we will discuss recent developments, strategies to create and optimise FRET biosensors and applications of FRET-based biosensors for use in the two major eukaryotic kingdoms and elaborate on different methods for FRET detection.

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Year:  2013        PMID: 24337770     DOI: 10.1007/s00709-013-0590-z

Source DB:  PubMed          Journal:  Protoplasma        ISSN: 0033-183X            Impact factor:   3.356


  98 in total

1.  Simulations of temperature sensitivity of the peroxidase-oxidase oscillator.

Authors:  Kirsten Rosendal Valeur; Robert degli Agosti
Journal:  Biophys Chem       Date:  2002-11-06       Impact factor: 2.352

2.  FluoQ: a tool for rapid analysis of multiparameter fluorescence imaging data applied to oscillatory events.

Authors:  Frank Stein; Manuel Kress; Sabine Reither; Alen Piljić; Carsten Schultz
Journal:  ACS Chem Biol       Date:  2013-08-06       Impact factor: 5.100

3.  Electrochemical biosensor for catechol using agarose-guar gum entrapped tyrosinase.

Authors:  Sanket Tembe; Shaukat Inamdar; Santosh Haram; Meena Karve; S F D'Souza
Journal:  J Biotechnol       Date:  2006-11-20       Impact factor: 3.307

Review 4.  Analyzing protein kinase dynamics in living cells with FRET reporters.

Authors:  Qiang Ni; Denis V Titov; Jin Zhang
Journal:  Methods       Date:  2006-11       Impact factor: 3.608

5.  High-density mapping of single-molecule trajectories with photoactivated localization microscopy.

Authors:  Suliana Manley; Jennifer M Gillette; George H Patterson; Hari Shroff; Harald F Hess; Eric Betzig; Jennifer Lippincott-Schwartz
Journal:  Nat Methods       Date:  2008-01-13       Impact factor: 28.547

6.  Dynamic imaging of glucose flux impedance using FRET sensors in wild-type Arabidopsis plants.

Authors:  Bhavna Chaudhuri; Friederike Hörmann; Wolf B Frommer
Journal:  J Exp Bot       Date:  2011-01-25       Impact factor: 6.992

7.  Reducing the environmental sensitivity of yellow fluorescent protein. Mechanism and applications.

Authors:  O Griesbeck; G S Baird; R E Campbell; D A Zacharias; R Y Tsien
Journal:  J Biol Chem       Date:  2001-05-31       Impact factor: 5.157

8.  Protonophore- and pH-insensitive glucose and sucrose accumulation detected by FRET nanosensors in Arabidopsis root tips.

Authors:  Bhavna Chaudhuri; Friederike Hörmann; Sylvie Lalonde; Siobhan M Brady; David A Orlando; Philip Benfey; Wolf B Frommer
Journal:  Plant J       Date:  2008-09-18       Impact factor: 6.417

9.  Ca2+ regulates reactive oxygen species production and pH during mechanosensing in Arabidopsis roots.

Authors:  Gabriele B Monshausen; Tatiana N Bibikova; Manfred H Weisenseel; Simon Gilroy
Journal:  Plant Cell       Date:  2009-08-04       Impact factor: 11.277

10.  Reversible dimerization of Aequorea victoria fluorescent proteins increases the dynamic range of FRET-based indicators.

Authors:  Ippei Kotera; Takuya Iwasaki; Hiromi Imamura; Hiroyuki Noji; Takeharu Nagai
Journal:  ACS Chem Biol       Date:  2010-02-19       Impact factor: 5.100

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  9 in total

1.  Design of a Water Soluble Fluorescent 3-Hydroxy-4-Pyridinone Ligand Active at Physiological pH Values.

Authors:  Andreia Leite; Ana M G Silva; Catarina Coutinho; Luís Cunha-Silva; Baltazar de Castro; Maria Rangel
Journal:  J Fluoresc       Date:  2016-06-29       Impact factor: 2.217

2.  Characterization of a spectrally diverse set of fluorescent proteins as FRET acceptors for mTurquoise2.

Authors:  Marieke Mastop; Daphne S Bindels; Nathan C Shaner; Marten Postma; Theodorus W J Gadella; Joachim Goedhart
Journal:  Sci Rep       Date:  2017-09-20       Impact factor: 4.379

Review 3.  A Perspective on Studying G-Protein-Coupled Receptor Signaling with Resonance Energy Transfer Biosensors in Living Organisms.

Authors:  Jakobus van Unen; Jeanette Woolard; Ago Rinken; Carsten Hoffmann; Stephen J Hill; Joachim Goedhart; Michael R Bruchas; Michel Bouvier; Merel J W Adjobo-Hermans
Journal:  Mol Pharmacol       Date:  2015-05-13       Impact factor: 4.436

4.  An in vivo biosensing, biomimetic electrochemical transistor with applications in plant science and precision farming.

Authors:  Nicola Coppedè; Michela Janni; Manuele Bettelli; Calogero Leandro Maida; Francesco Gentile; Marco Villani; Roberta Ruotolo; Salvatore Iannotta; Nelson Marmiroli; Marta Marmiroli; Andrea Zappettini
Journal:  Sci Rep       Date:  2017-11-23       Impact factor: 4.379

5.  Simultaneous readout of multiple FRET pairs using photochromism.

Authors:  Thijs Roebroek; Wim Vandenberg; François Sipieter; Siewert Hugelier; Christophe Stove; Jin Zhang; Peter Dedecker
Journal:  Nat Commun       Date:  2021-03-31       Impact factor: 14.919

6.  A biosensor for the direct visualization of auxin.

Authors:  Ole Herud-Sikimić; Andre C Stiel; Martina Kolb; Sooruban Shanmugaratnam; Kenneth W Berendzen; Christian Feldhaus; Birte Höcker; Gerd Jürgens
Journal:  Nature       Date:  2021-04-07       Impact factor: 49.962

7.  A Toolbox of Genetically Encoded FRET-Based Biosensors for Rapid l-Lysine Analysis.

Authors:  Victoria Steffen; Julia Otten; Susann Engelmann; Andreas Radek; Michael Limberg; Bernd W Koenig; Stephan Noack; Wolfgang Wiechert; Martina Pohl
Journal:  Sensors (Basel)       Date:  2016-09-28       Impact factor: 3.576

8.  A New Generation of FRET Sensors for Robust Measurement of Gαi1, Gαi2 and Gαi3 Activation Kinetics in Single Cells.

Authors:  Jakobus van Unen; Anette D Stumpf; Benedikt Schmid; Nathalie R Reinhard; Peter L Hordijk; Carsten Hoffmann; Theodorus W J Gadella; Joachim Goedhart
Journal:  PLoS One       Date:  2016-01-22       Impact factor: 3.240

9.  Optimizing FRET-FLIM Labeling Conditions to Detect Nuclear Protein Interactions at Native Expression Levels in Living Arabidopsis Roots.

Authors:  Yuchen Long; Yvonne Stahl; Stefanie Weidtkamp-Peters; Wouter Smet; Yujuan Du; Theodorus W J Gadella; Joachim Goedhart; Ben Scheres; Ikram Blilou
Journal:  Front Plant Sci       Date:  2018-05-15       Impact factor: 5.753

  9 in total

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