| Literature DB >> 24330703 |
Laurens J Westerman, Marguerite Ei Schipper, Herbert V Stel, Marc Jm Bonten, Johannes G Kusters1.
Abstract
BACKGROUND: Acute appendicitis is a surgical emergency in which the appendix is surgically removed to prevent peritonitis due to perforation of the appendix. Depending on age and gender, up to 17% of removed appendices do not show the histopathological changes pathognomonic for acute appendicitis and are called 'pseudo-appendicitis'. Intestinal spirochaetes have been reported in up to 12.3% of these non-inflamed appendices obtained from adults. Although children carry the highest risk for acute appendicitis, not much is known on the prevalence of intestinal spirochaetes in children. The aim of this study was to determine whether there is an association between pseudo-appendicitis and appendiceal spirochaetosis in children.Entities:
Year: 2013 PMID: 24330703 PMCID: PMC4029455 DOI: 10.1186/1757-4749-5-40
Source DB: PubMed Journal: Gut Pathog ISSN: 1757-4749 Impact factor: 4.181
Primer-sets, amplicon length, annealing temperature, amplification time and PCR-protocols
| Bspp | B.spp FW | AACATggACTAATACCgCATATAC | 147 bp |
| B.spp probe | LC610-TgAgCCTgCggCCTATTAgCC-BBQ | ||
| B.spp REV | CTCAggTCggCTACCTATC | ||
| β-globulin | β glob FW (GH20) | gAAgAgCCAAggACAggTAC | 268 bp |
| β glob probe | Cy5-TCTgCCgTTACTgCCCTgT-BBQ | ||
| β glob REV (PC04) | CAACTTCATCCACgTTCACC | ||
| PhHV | PhHV FW | gggCgAATCACAgATTgAATC | 89 bp |
| PhHV probe | LC640-TTTTTATgTgTCCgCCACCATCTggATC-BBQ | ||
| PhHV REV | gCggTTCCAAACgTACCAA | ||
| Step A | Step A FW | TggATAAgTTAgCggCgAACTg | 212 bp |
| Step A REV | TCAggTCggCTACCTATCg | ||
| Step B | Step B FW | gAgCCTgCggCCTATTAgC | 253 bp |
| Step B REV | gCCgAggCTTACATTATCTACTgTC | ||
| Step C | Step C FW | AgCgACATCgCgTgAgg | 258 bp |
| Step C REV | TCCATCATCCCCTACAATATCCAAg |
PCR conditions.
Primer concentration: 2,5 μM of both forward and reverse primers.
Buffer composition.
Probe PCR: LightCycler® 480 Probes Master (Version 09).
Step A-C PCR: LightCycler® 480 SYBR Green I Master (Version 12).
PCR volume.
Probe: 13 μl buffer and 2 μl DNA-eluate.
Step A-C: 15 μl buffer and 5 μl DNA-eluate.
PCR consumables (probe and Step A-C).
White 96-well plate (Roche Diagnostics, Almere, The Netherlands) sealed with transparent self-adhesive foil (Roche Diagnostics, Almere, The Netherlands).
PCR protocol.
Probe PCR: pre-incubation at 95°C for 10 minutes, denaturing at 95°C for 10 seconds, amplification at 60°C one minute, 45 cycles.
Step A-C PCR: pre-incubation at 95°C for 10 minutes, denaturing at 95°C for 10 seconds, 10 seconds annealing at 62°C, amplification at 72°C one minute, 45 cycles. Melting-curve analysis: 5 seconds at 95°C, one minute at 65°C, 2.2°C per second increase of temperature until 97°C with five acquisitions per degree Celsius.
Immunohistochemistry and PCR result
| Negative | 135 | 2 | 0 | 0 | 0 |
| Positive | 1 | 0 | 1 | 2 | 1 |
Prevalence of appendiceal spirochaetosis
| Mazza (1930)
[ | 38/394 (9.6%) | Not specified | Not specified | Not specified | Not specified |
| Lee (1971)
[ | 62/790 (7.8%) | 7/160 (4.4%) | 51/523 (9.8%) | 4/107 (3.7%) | Not specified |
| Takeuchi (1974)
[ | 8/388 (2.1%) | Not specified | Not specified | Not specified | Not specified |
| Henrik-Nielsen (1985)
[ | 18/671 (2.7%) | 3/414 (0.7%) | 13/106 (12.3%) | 2/107 (1.9%) | 0/44 (0%) |
| Yang (1997)
[ | 4/109 (3.7%) | 1/72 (1.4%) | 1/16 (6.3%) | 1/9 (11.1%) | 1/12 (8.3%) |
| Haleem (2003)
[ | 2/598 (0.3%) | 0/473 (0%) | 2/97 (2.1%) | Not specified | 0/28 (0%) |
| Westerman (this study) | 5/142 (3.5%) | 1/59 (1.7%) | 2/50 (4.0%) | 2/33 (6.1%) | Not applicable |