Literature DB >> 24329333

Infinite-dimensional Bayesian filtering for detection of quasiperiodic phenomena in spatiotemporal data.

Arno Solin1, Simo Särkkä1.   

Abstract

This paper introduces a spatiotemporal resonator model and an inference method for detection and estimation of nearly periodic temporal phenomena in spatiotemporal data. The model is derived as a spatial extension of a stochastic harmonic resonator model, which can be formulated in terms of a stochastic differential equation. The spatial structure is included by introducing linear operators, which affect both the oscillations and damping, and by choosing the appropriate spatial covariance structure of the driving time-white noise process. With the choice of the linear operators as partial differential operators, the resonator model becomes a stochastic partial differential equation, which is compatible with infinite-dimensional Kalman filtering. The resulting infinite-dimensional Kalman filtering problem allows for a computationally efficient solution as the computational cost scales linearly with measurements in the temporal dimension. This framework is applied to weather prediction and to physiological noise elimination in functional magnetic resonance imaging brain data.

Year:  2013        PMID: 24329333     DOI: 10.1103/PhysRevE.88.052909

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  2 in total

1.  Dynamic decomposition of spatiotemporal neural signals.

Authors:  Luca Ambrogioni; Marcel A J van Gerven; Eric Maris
Journal:  PLoS Comput Biol       Date:  2017-05-30       Impact factor: 4.475

2.  Identifying stochastic oscillations in single-cell live imaging time series using Gaussian processes.

Authors:  Nick E Phillips; Cerys Manning; Nancy Papalopulu; Magnus Rattray
Journal:  PLoS Comput Biol       Date:  2017-05-11       Impact factor: 4.475

  2 in total

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