Literature DB >> 24326976

Competition between n → π(Ar)* and conventional hydrogen bonding (N-H···N) interactions: an ab initio study of the complexes of 7-azaindole and fluorosubstituted pyridines.

Santosh K Singh1, Sumit Kumar, Aloke Das.   

Abstract

In this work, we have investigated a subtle competition between a very weak n → π(Ar)* interaction and a very strong hydrogen bond (N-H···N) interaction present in the complexes of 7-azaindole with a series of 2,6-substituted fluoropyridines and observed how the weak interaction modulates the overall structural motif of these complexes in the presence of the strong interaction. We have studied the structures and binding energies of these complexes using MP2 as well as dispersion-corrected DFT calculations. It has been found that the strength of the N-H···N interaction in these complexes decreases with increasing fluorination in the fluoropyridine ring while the proximity between the nitrogen atom in 7-azaindole and the aromatic ring of fluoropyridine increases through n → π(Ar)* interaction. Comparison of the binding energy values as well as structural parameters of these complexes calculated at the B3LYP level with those obtained at the MP2, M05-2X, and B97-D levels of theory clearly indicates that the dispersion effect is mostly responsible for this attractive n → π(Ar)* interaction. This conclusion is also supported by localized molecular orbital-energy decomposition analysis (LMO-EDA). The current investigation is the first theoretical study on the n → π(Ar)* interaction in the presence of a conventional strong hydrogen bonding interaction in the molecular system. Thus the present study has great significance for understanding the structures of the biomolecules as well as materials, as these interactions are very often present there simultaneously.

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Year:  2014        PMID: 24326976     DOI: 10.1039/c3cp54169j

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  7 in total

1.  Unconventional N-H…N Hydrogen Bonds Involving Proline Backbone Nitrogen in Protein Structures.

Authors:  R N V Krishna Deepak; Ramasubbu Sankararamakrishnan
Journal:  Biophys J       Date:  2016-05-10       Impact factor: 4.033

2.  Competition between π-hole interaction and hydrogen bond in the complexes of F2XO (X = C and Si) and HCN.

Authors:  Xin Guo; Lishui Cao; Qingzhong Li; Wenzuo Li; Jianbo Cheng
Journal:  J Mol Model       Date:  2014-10-23       Impact factor: 1.810

3.  Enantiodivergent Fluorination of Allylic Alcohols: Data Set Design Reveals Structural Interplay between Achiral Directing Group and Chiral Anion.

Authors:  Andrew J Neel; Anat Milo; Matthew S Sigman; F Dean Toste
Journal:  J Am Chem Soc       Date:  2016-03-11       Impact factor: 15.419

Review 4.  Exploiting non-covalent π interactions for catalyst design.

Authors:  Andrew J Neel; Margaret J Hilton; Matthew S Sigman; F Dean Toste
Journal:  Nature       Date:  2017-03-29       Impact factor: 49.962

5.  Theoretical investigation on hydrogen bond interaction of diketo/keto-enol form uracil and thymine tautomers with intercalators.

Authors:  V S Anithaa; S Vijayakumar; M Sudha; R Shankar
Journal:  J Mol Model       Date:  2017-11-06       Impact factor: 1.810

6.  The n→π* Interaction.

Authors:  Robert W Newberry; Ronald T Raines
Journal:  Acc Chem Res       Date:  2017-07-23       Impact factor: 22.384

7.  Cross-Talk between Overlap Interactions in Biomolecules: A Case Study of the β-Turn Motif.

Authors:  Jayashree Nagesh
Journal:  Molecules       Date:  2021-03-11       Impact factor: 4.411

  7 in total

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