Literature DB >> 24320543

Inter-slice bidirectional registration-based segmentation of the prostate gland in MR and CT image sequences.

Farzad Khalvati1, Aryan Salmanpour, Shahryar Rahnamayan, George Rodrigues, Hamid R Tizhoosh.   

Abstract

PURPOSE: Accurate segmentation and volume estimation of the prostate gland in magnetic resonance (MR) and computed tomography (CT) images are necessary steps in diagnosis, treatment, and monitoring of prostate cancer. This paper presents an algorithm for the prostate gland volume estimation based on the semiautomated segmentation of individual slices in T2-weighted MR and CT image sequences.
METHODS: The proposed Inter-Slice Bidirectional Registration-based Segmentation (iBRS) algorithm relies on interslice image registration of volume data to segment the prostate gland without the use of an anatomical atlas. It requires the user to mark only three slices in a given volume dataset, i.e., the first, middle, and last slices. Next, the proposed algorithm uses a registration algorithm to autosegment the remaining slices. We conducted comprehensive experiments to measure the performance of the proposed algorithm using three registration methods (i.e., rigid, affine, and nonrigid techniques).
RESULTS: The results with the proposed technique were compared with manual marking using prostate MR and CT images from 117 patients. Manual marking was performed by an expert user for all 117 patients. The median accuracies for individual slices measured using the Dice similarity coefficient (DSC) were 92% and 91% for MR and CT images, respectively. The iBRS algorithm was also evaluated regarding user variability, which confirmed that the algorithm was robust to interuser variability when marking the prostate gland.
CONCLUSIONS: The proposed algorithm exploits the interslice data redundancy of the images in a volume dataset of MR and CT images and eliminates the need for an atlas, minimizing the computational cost while producing highly accurate results which are robust to interuser variability.

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Year:  2013        PMID: 24320543     DOI: 10.1118/1.4829511

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  3 in total

1.  Sequential Registration-Based Segmentation of the Prostate Gland in MR Image Volumes.

Authors:  Farzad Khalvati; Aryan Salmanpour; Shahryar Rahnamayan; Masoom A Haider; H R Tizhoosh
Journal:  J Digit Imaging       Date:  2016-04       Impact factor: 4.056

2.  Fully automated segmentation of prostate whole gland and transition zone in diffusion-weighted MRI using convolutional neural networks.

Authors:  Tyler Clark; Junjie Zhang; Sameer Baig; Alexander Wong; Masoom A Haider; Farzad Khalvati
Journal:  J Med Imaging (Bellingham)       Date:  2017-10-17

3.  Superpixel-Based Segmentation for 3D Prostate MR Images.

Authors:  Zhiqiang Tian; Lizhi Liu; Zhenfeng Zhang; Baowei Fei
Journal:  IEEE Trans Med Imaging       Date:  2015-10-30       Impact factor: 10.048

  3 in total

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