Literature DB >> 24315603

An integratable microfluidic cartridge for forensic swab samples lysis.

Jianing Yang1, Carla Brooks, Matthew D Estes, Cedric M Hurth, Frederic Zenhausern.   

Abstract

Fully automated rapid forensic DNA analysis requires integrating several multistep processes onto a single microfluidic platform, including substrate lysis, extraction of DNA from the released lysate solution, multiplexed PCR amplification of STR loci, separation of PCR products by capillary electrophoresis, and analysis for allelic peak calling. Over the past several years, most of the rapid DNA analysis systems developed started with the reference swab sample lysate and involved an off-chip lysis of collected substrates. As a result of advancement in technology and chemistry, addition of a microfluidic module for swab sample lysis has been achieved in a few of the rapid DNA analysis systems. However, recent reports on integrated rapid DNA analysis systems with swab-in and answer-out capability lack any quantitative and qualitative characterization of the swab-in sample lysis module, which is important for downstream forensic sample processing. Maximal collection and subsequent recovery of the biological material from the crime scene is one of the first and critical steps in forensic DNA technology. Herein we present the design, fabrication and characterization of an integratable swab lysis cartridge module and the test results obtained from different types of commonly used forensic swab samples, including buccal, saliva, and blood swab samples, demonstrating the compatibility with different downstream DNA extraction chemistries. This swab lysis cartridge module is easy to operate, compatible with both forensic and microfluidic requirements, and ready to be integrated with our existing automated rapid forensic DNA analysis system. Following the characterization of the swab lysis module, an integrated run from buccal swab sample-in to the microchip CE electropherogram-out was demonstrated on the integrated prototype instrument. Therefore, in this study, we demonstrate that this swab lysis cartridge module is: (1) functionally, comparable with routine benchtop lysis, (2) compatible with various types of swab samples and chemistries, and (3) integratable to achieve a micro total analysis system (μTAS) for rapid DNA analysis.
Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

Keywords:  DNA extraction and, quantification; Forensic swab sample; Integratable; Lysis efficiency; STR analysis; Swab lysis cartridge

Mesh:

Year:  2013        PMID: 24315603     DOI: 10.1016/j.fsigen.2013.08.012

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  3 in total

Review 1.  Capillary electrophoresis applied to DNA: determining and harnessing sequence and structure to advance bioanalyses (2009-2014).

Authors:  Brandon C Durney; Cassandra L Crihfield; Lisa A Holland
Journal:  Anal Bioanal Chem       Date:  2015-05-03       Impact factor: 4.142

Review 2.  Microfluidic Devices for Forensic DNA Analysis: A Review.

Authors:  Brigitte Bruijns; Arian van Asten; Roald Tiggelaar; Han Gardeniers
Journal:  Biosensors (Basel)       Date:  2016-08-05

3.  A Sensitive, Portable Microfluidic Device for SARS-CoV-2 Detection from Self-Collected Saliva.

Authors:  Jianing Yang; Mark Kidd; Alan R Nordquist; Stanley D Smith; Cedric Hurth; Irvin M Modlin; Frederic Zenhausern
Journal:  Infect Dis Rep       Date:  2021-12-14
  3 in total

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