Literature DB >> 24314671

Drug discovery considerations in the development of covalent inhibitors.

Robert Mah1, Jason R Thomas2, Cynthia M Shafer3.   

Abstract

In recent years, the number of drug candidates with a covalent mechanism of action progressing through clinical trials or being approved by the FDA has increased significantly. And as interest in covalent inhibitors has increased, the technical challenges for characterizing and optimizing these inhibitors have become evident. A number of new tools have been developed to aid this process, but these have not gained wide-spread use. This review will highlight a number of methods and tools useful for prosecuting covalent inhibitor drug discovery programs.
Copyright © 2013 The Authors. Published by Elsevier Ltd.. All rights reserved.

Keywords:  Activity-based protein profiling (ABPP); Click chemistry; Covalent inhibitor; Mechanism-based inhibitor; Targeted covalent inhibitor (TCI); Warhead reactivity; k(inact)/K(i)

Mesh:

Substances:

Year:  2013        PMID: 24314671     DOI: 10.1016/j.bmcl.2013.10.003

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  50 in total

1.  The Proteome-Wide Potential for Reversible Covalency at Cysteine.

Authors:  Kristine Senkane; Ekaterina V Vinogradova; Radu M Suciu; Vincent M Crowley; Balyn W Zaro; J Michael Bradshaw; Ken A Brameld; Benjamin F Cravatt
Journal:  Angew Chem Int Ed Engl       Date:  2019-07-05       Impact factor: 15.336

2.  Nitro Sulfonyl Fluorides are a new pharmacophore for the development of antibiotics.

Authors:  Corinne Sadlowski; Bora Park; Clarissa Araújo; Subhamoy Das; D Lucas Kerr; Maomao He; Hesong Han; Lee Riley; Niren Murthy
Journal:  Mol Syst Des Eng       Date:  2018-06-07

3.  Covalent docking using autodock: Two-point attractor and flexible side chain methods.

Authors:  Giulia Bianco; Stefano Forli; David S Goodsell; Arthur J Olson
Journal:  Protein Sci       Date:  2015-07-07       Impact factor: 6.725

4.  Mechanistic understanding of molecular initiating events (MIEs) using NMR spectroscopy.

Authors:  Paul N Sanderson; Wendy Simpson; Richard Cubberley; Maja Aleksic; Stephen Gutsell; Paul J Russell
Journal:  Toxicol Res (Camb)       Date:  2015-09-15       Impact factor: 3.524

5.  Ranking Reversible Covalent Drugs: From Free Energy Perturbation to Fragment Docking.

Authors:  Han Zhang; Wenjuan Jiang; Payal Chatterjee; Yun Luo
Journal:  J Chem Inf Model       Date:  2019-02-27       Impact factor: 4.956

6.  Inhibition of Mcl-1 through covalent modification of a noncatalytic lysine side chain.

Authors:  Gizem Akçay; Matthew A Belmonte; Brian Aquila; Claudio Chuaqui; Alexander W Hird; Michelle L Lamb; Philip B Rawlins; Nancy Su; Sharon Tentarelli; Neil P Grimster; Qibin Su
Journal:  Nat Chem Biol       Date:  2016-09-05       Impact factor: 15.040

7.  Expanding the Scope of Electrophiles Capable of Targeting K-Ras Oncogenes.

Authors:  Lynn M McGregor; Meredith L Jenkins; Caitlin Kerwin; John E Burke; Kevan M Shokat
Journal:  Biochemistry       Date:  2017-06-16       Impact factor: 3.162

Review 8.  Selective and Effective: Current Progress in Computational Structure-Based Drug Discovery of Targeted Covalent Inhibitors.

Authors:  Giulia Bianco; David S Goodsell; Stefano Forli
Journal:  Trends Pharmacol Sci       Date:  2020-11-02       Impact factor: 14.819

Review 9.  Interactions between Microtubule-Associated Protein Tau (MAPT) and Small Molecules.

Authors:  Jennifer N Rauch; Steven H Olson; Jason E Gestwicki
Journal:  Cold Spring Harb Perspect Med       Date:  2017-07-05       Impact factor: 6.915

Review 10.  Targeting Non-Catalytic Cysteine Residues Through Structure-Guided Drug Discovery.

Authors:  Kenneth K Hallenbeck; David M Turner; Adam R Renslo; Michelle R Arkin
Journal:  Curr Top Med Chem       Date:  2017       Impact factor: 3.295

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