Literature DB >> 24307568

The 2.0₅-helix in hetero-oligopeptides entirely composed of C(α,α)-disubstituted glycines with both side chains longer than methyls.

Marco Crisma1, Cristina Peggion, Alessandro Moretto, Raja Banerjee, Subhrangshu Supakar, Fernando Formaggio, Claudio Toniolo.   

Abstract

The existence of the very uncommon, but potentially quite interesting, multiple, consecutive fully-extended conformation (2.0₅-helix) has been already clearly demonstrated in homo-oligopeptides based on quaternary α-amino acids with both side chains longer than methyls, but not cyclized on the α-carbon atom. To extend the scope of this research, in this work we investigated the occurrence of this flat 3D-structure in hetero-oligopeptides, each composed of two or three different residues of that class. The synthesis of a terminally protected peptide series to the tetrapeptide level was carried out by solution methods. The resulting oligomers were chemically and conformationally characterized. The data obtained point to an overwhelming population of the fully-extended conformation in CDCl3. However, a solvent-driven switch to a predominant 3₁₀-helical structure was seen in CD3CN. A delicate, local balance between these two conformations is confirmed to occur in the crystalline state. Molecular dynamics simulations in CHCl3 on a hetero-tetrapeptide converged to the fully-extended conformation even starting from the 3₁₀-helical structure.
Copyright © 2013 Wiley Periodicals, Inc.

Entities:  

Keywords:  Cα-tetrasubstituted α-amino acids; IR absorption; NMR; X-ray diffraction; molecular dynamics simulations; peptide conformation

Mesh:

Substances:

Year:  2014        PMID: 24307568     DOI: 10.1002/bip.22450

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  2 in total

1.  Synthesis and Deployment of an Elusive Fluorovinyl Cation Equivalent: Access to Quaternary α-(1'-Fluoro)vinyl Amino Acids as Potential PLP Enzyme Inactivators.

Authors:  Christopher D McCune; Matthew L Beio; Jill M Sturdivant; Roberto de la Salud-Bea; Brendan M Darnell; David B Berkowitz
Journal:  J Am Chem Soc       Date:  2017-09-28       Impact factor: 15.419

2.  Application of Threonine Aldolases for the Asymmetric Synthesis of α-Quaternary α-Amino Acids.

Authors:  Julia Blesl; Melanie Trobe; Felix Anderl; Rolf Breinbauer; Gernot A Strohmeier; Kateryna Fesko
Journal:  ChemCatChem       Date:  2018-07-04       Impact factor: 5.686

  2 in total

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